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Transfer entropy (TE) is an information theoretic measure that reveals the directional flow of information between processes, providing valuable insights for a wide range of real-world applications. This work proposes Transfer Entropy…

Information Theory · Computer Science 2025-07-22 Omer Luxembourg , Dor Tsur , Haim Permuter

Like natural complex systems such as the Earth's climate or a living cell, semiconductor lithography systems are characterized by nonlinear dynamics across more than a dozen orders of magnitude in space and time. Thousands of sensors…

Information Theory · Computer Science 2021-04-07 Errol Zalmijn , Tom Heskes , Tom Claassen

The entanglement entropy of a subsystem of a quantum system is expressed, in the replica approach, through analytic continuation with respect to n of the trace of the n-th power of the reduced density matrix. This trace can be thought of as…

High Energy Physics - Theory · Physics 2008-12-18 Michele Caraglio , Ferdinando Gliozzi

Information transfer between time series is calculated by using the asymmetric information-theoretic measure known as transfer entropy. Geweke's autoregressive formulation of Granger causality is used to find linear transfer entropy, and…

Data Analysis, Statistics and Probability · Physics 2023-03-24 Z. Keskin , T. Aste

The standard approach to modeling the human brain as a complex system is with a network, where the basic unit of interaction is a pairwise link between two brain regions. While powerful, this approach is limited by the inability to assess…

Neurons and Cognition · Quantitative Biology 2023-01-16 Thomas F Varley , Maria Pope , Maria Grazia Puxeddu , Joshua Faskowitz , Olaf Sporns

Topological entanglement entropy (TEE) is a key diagnostic of topological order, allowing to detect the presence of Abelian or non-Abelian anyons. However, there are currently no protocols to measure TEE in condensed matter systems. Here,…

Mesoscale and Nanoscale Physics · Physics 2023-07-19 Sarath Sankar , Eran Sela , Cheolhee Han

Transfer learning is a critical technique in training deep neural networks for the challenging medical image segmentation task that requires enormous resources. With the abundance of medical image data, many research institutions release…

Computer Vision and Pattern Recognition · Computer Science 2023-07-25 Yuncheng Yang , Meng Wei , Junjun He , Jie Yang , Jin Ye , Yun Gu

At present, multi-electrode array (MEA) approach and optical recording allow us to acquire plant electrical activity with higher spatio-temporal resolution. To understand the dynamic information flow of the electrical signaling system and…

Neurons and Cognition · Quantitative Biology 2017-04-03 Yang Chen , Dong-Jie Zhao , Chao Song , Wei-He Liu , Zi-Yang Wang , Zhong-Yi Wang , Guiliang Tang , Lan Huang

The description of the dynamics of complex systems, in particular the capture of the interaction structure and causal relationships between elements of the system, is one of the central questions of interdisciplinary research. While the…

Machine Learning · Statistics 2025-04-30 Jakub Kořenek , Pavel Sanda , Jaroslav Hlinka

Strongly interacting systems can be described in terms of correlation functions at various orders. A quantum analog of high-order correlations is the topological entanglement in topologically ordered states of matter at zero temperature,…

Quantum Physics · Physics 2023-11-08 Shi Feng , Deqian Kong , Nandini Trivedi

Persistent entropy (PE) is an information-theoretic summary statistic of persistence barcodes that has been widely used to detect regime changes in complex systems. Despite its empirical success, a general theoretical understanding of when…

Machine Learning · Statistics 2026-02-11 Matteo Rucco

A measure is derived to quantify directed information transfer between pairs of vertices in a weighted network, over paths of a specified maximal length. Our approach employs a general, probabilistic model of network traffic, from which the…

Disordered Systems and Neural Networks · Physics 2013-11-05 Christopher R. S. Banerji , Simone Severini , Andrew E. Teschendorff

Many dynamical phenomena in complex systems concern spreading that plays out on top of networks with changing architecture over time -- commonly known as temporal networks. A complex system's proneness to facilitate spreading phenomena,…

Physics and Society · Physics 2022-05-06 Mark M. Dekker , Raoul D. Schram , Jiamin Ou , Debabrata Panja

The thermodynamic definition of entropy can be extended to nonequilibrium systems based on its relation to information. To apply this definition in practice requires access to the physical system's microstates, which may be prohibitively…

Statistical Mechanics · Physics 2020-08-21 Gil Ariel , Haim Diamant

Positional encoding is essential for supplementing transformer with positional information of tokens. Existing positional encoding methods demand predefined token/feature order, rendering them unsuitable for real-world data with…

Machine Learning · Computer Science 2025-09-25 Kaichen Xu , Yihang Du , Mianpeng Liu , Zimu Yu , Xiaobo Sun

The analysis of temporal networks heavily depends on the analysis of time-respecting paths. However, before being able to model and analyze the time-respecting paths, we have to infer the timescales at which the temporal edges influence…

Physics and Society · Physics 2023-01-30 Luka V. Petrović , Anatol Wegner , Ingo Scholtes

Discovering causal direction from temporal observational data is particularly challenging for symbolic sequences, where functional models and noise assumptions are often unavailable. We propose a novel \emph{Dictionary Based Pattern Entropy…

Machine Learning · Statistics 2026-03-06 Harikrishnan N B , Shubham Bhilare , Aditi Kathpalia , Nithin Nagaraj

Entanglement entropies of two-dimensional gapped ground states are expected to satisfy an area law, with a constant correction term known as the topological entanglement entropy (TEE). In many models, the TEE takes a universal value that…

Quantum Physics · Physics 2023-11-02 Isaac H. Kim , Michael Levin , Ting-Chun Lin , Daniel Ranard , Bowen Shi

Transfer entropy (TE) was introduced by Schreiber in 2000 as a measurement of the predictive capacity of one stochastic process with respect to another. Originally stated for discrete time processes, we expand the theory in line with recent…

Probability · Mathematics 2019-07-02 Joshua N. Cooper , Christopher D. Edgar

We investigate causal inference in the asymptotic regime as the number of variables approaches infinity using an information-theoretic framework. We define structural entropy of a causal model in terms of its description complexity measured…

Artificial Intelligence · Computer Science 2021-09-21 Sridhar Mahadevan