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We address here the problem of generating random graphs uniformly from the set of simple connected graphs having a prescribed degree sequence. Our goal is to provide an algorithm designed for practical use both because of its ability to…

Networking and Internet Architecture · Computer Science 2007-05-23 Fabien Viger , Matthieu Latapy

Simple algebraic rules can produce complex networks with rich structures. These graphs are obtained when looking at a monoid operating on a ring. There are relations to dynamical systems theory and number theory. This document illustrates…

Dynamical Systems · Mathematics 2013-11-19 Oliver Knill

Given the growing importance of large-scale graph analytics, there is a need to improve the performance of graph analysis frameworks without compromising on productivity. GraphMat is our solution to bridge this gap between a user-friendly…

In this work, we introduce a new algorithm for analyzing a diagram, which contains visual and textual information in an abstract and integrated way. Whereas diagrams contain richer information compared with individual image-based or…

Computer Vision and Pattern Recognition · Computer Science 2017-11-28 Daesik Kim , Youngjoon Yoo , Jeesoo Kim , Sangkuk Lee , Nojun Kwak

A graph generative model defines a distribution over graphs. One type of generative model is constructed by autoregressive neural networks, which sequentially add nodes and edges to generate a graph. However, the likelihood of a graph under…

Machine Learning · Statistics 2021-06-15 Xiaohui Chen , Xu Han , Jiajing Hu , Francisco J. R. Ruiz , Liping Liu

Graph neural networks have demonstrated state-of-the-art performance on knowledge graph tasks such as link prediction. However, interpreting GNN predictions remains a challenging open problem. While many GNN explainability methods have been…

Machine Learning · Computer Science 2025-06-17 Ryoji Kubo , Djellel Difallah

Graph-based retrieval-augmented generation (GraphRAG) has recently emerged as a powerful paradigm for knowledge-intensive question answering, especially for tasks that require structured evidence organization and multi-hop reasoning.…

Information Retrieval · Computer Science 2026-04-21 Dongzhe Fan , Chuanhao Ji , Zimu Wang , Tong Chen , Qiaoyu Tan

Networks can be highly complex systems with numerous interconnected components and interactions. Granular computing offers a framework to manage this complexity by decomposing networks into smaller, more manageable components, or granules.…

Social and Information Networks · Computer Science 2025-03-06 Hibba Arshad , Imran Javaid

Many problems in machine learning can be cast as learning functions from sets to graphs, or more generally to hypergraphs; in short, Set2Graph functions. Examples include clustering, learning vertex and edge features on graphs, and learning…

Machine Learning · Computer Science 2020-11-30 Hadar Serviansky , Nimrod Segol , Jonathan Shlomi , Kyle Cranmer , Eilam Gross , Haggai Maron , Yaron Lipman

In this work we propose R-GPM, a parallel computing framework for graph pattern mining (GPM) through a user-defined subgraph relation. More specifically, we enable the computation of statistics of patterns through their subgraph classes,…

Machine Learning · Computer Science 2020-10-13 Carlos H. C. Teixeira , Leonardo Cotta , Bruno Ribeiro , Wagner Meira

Matrix completion models are among the most common formulations of recommender systems. Recent works have showed a boost of performance of these techniques when introducing the pairwise relationships between users/items in the form of…

Machine Learning · Computer Science 2017-04-25 Federico Monti , Michael M. Bronstein , Xavier Bresson

The abundance of interconnected data has fueled the design and implementation of graph generators reproducing real-world linking properties, or gauging the effectiveness of graph algorithms, techniques and applications manipulating these…

Databases · Computer Science 2020-01-23 Angela Bonifati , Irena Holubová , Arnau Prat-Pérez , Sherif Sakr

A linear graph is a graph whose vertices are totally ordered. Biological and linguistic sequences with interactions among symbols are naturally represented as linear graphs. Examples include protein contact maps, RNA secondary structures…

Data Structures and Algorithms · Computer Science 2011-03-08 Yasuo Tabei , Daisuke Okanohara , Shuichi Hirose , Koji Tsuda

The degree distributions of complex networks are usually considered to be power law. However, it is not the case for a large number of them. We thus propose a new model able to build random growing networks with (almost) any wanted degree…

Social and Information Networks · Computer Science 2020-12-08 Thibaud Trolliet , Frédéric Giroire , Stéphane Pérennes

In the field of complex networks and graph theory, new results are typically tested on graphs generated by a variety of algorithms such as the Erd\H{o}s-R\'{e}nyi model or the Barab\'{a}si-Albert model. Unfortunately, most graph generating…

Combinatorics · Mathematics 2018-08-16 Isaac Klickstein , Francesco Sorrentino

Net-trees are a general purpose data structure for metric data that have been used to solve a wide range of algorithmic problems. We give a simple randomized algorithm to construct net-trees on doubling metrics using $O(n\log n)$ time in…

Computational Geometry · Computer Science 2018-09-06 Mahmoodreza Jahanseir , Donald R. Sheehy

Matrix Graph Grammars (MGG) is a novel approach to the study of graph dynamics ([15]). In the present contribution we look at MGG as a formal grammar and as a model of computation, which is a necessary step in the more ambitious program of…

Discrete Mathematics · Computer Science 2009-11-16 Pedro Pablo Perez Velasco

We consider the following common network analysis problem: given a degree sequence $\mathbf{d} = (d_1, \dots, d_n) \in \mathbb N^n$ return a uniform sample from the ensemble of all simple graphs with matching degrees. In practice, the…

Data Structures and Algorithms · Computer Science 2021-10-29 Daniel Allendorf , Ulrich Meyer , Manuel Penschuck , Hung Tran , Nick Wormald

Knitting, an ancient fiber art, creates a structured fabric consisting of loops or stitches. Publishing hand knitting patterns involves lengthy testing periods and numerous knitters. Modeling knitting patterns with graphs can help expedite…

Human-Computer Interaction · Computer Science 2024-06-21 Kathryn Gray , Brian Bell , Stephen Kobourov

Graph of Thoughts (GoT), a generalized form of recent prompting paradigms for large language models (LLMs), has been shown to be useful for elaborate problem solving. By executing a graph of operations, thoughts of the LLM are structured as…

Machine Learning · Computer Science 2026-05-22 Manuel Noah Riesen , Peter Alfred von Niederhäusern