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Most empirical studies of networks assume that the network data we are given represent a complete and accurate picture of the nodes and edges in the system of interest, but in real-world situations this is rarely the case. More often the…

Social and Information Networks · Computer Science 2019-01-02 M. E. J. Newman

Probabilistic graphical models offer a powerful framework to account for the dependence structure between variables, which is represented as a graph. However, the dependence between variables may render inference tasks intractable. In this…

In this paper, we consider the problem of distributed inference in tree based networks. In the framework considered in this paper, distributed nodes make a 1-bit local decision regarding a phenomenon before sending it to the fusion center…

Information Theory · Computer Science 2016-11-17 Bhavya Kailkhura , Aditya Vempaty , Pramod K. Varshney

Nested structure, which is non-random, controls cooperation dynamics and biodiversity in plant-animal mutualistic networks. This structural pattern has been explained in a static (non-growth) network models. However, evolutionary processes…

Populations and Evolution · Quantitative Biology 2015-03-19 Kazuhiro Takemoto , Masanori Arita

In-depth studies of sociotechnical systems are largely limited to single instances. Network surveys are expensive, and platforms vary in important ways, from interface design, to social norms, to historical contingencies. With single…

Social and Information Networks · Computer Science 2018-11-06 Abigail Z. Jacobs

Mutualistic interactions, which are beneficial for both interacting species, are recurrently present in ecosystems. Observations of natural systems showed that, if we draw mutualistic relationships as binary links between species, the…

Physics and Society · Physics 2019-08-21 Clàudia Payrató Borrás , Laura Hernández , Yamir Moreno

Network datasets typically exhibit certain types of statistical dependencies, such as within-dyad correlation, row and column heterogeneity, and third-order dependence patterns such as transitivity and clustering. The first two of these can…

Methodology · Statistics 2018-07-24 Peter D. Hoff

We consider a multi-species community modelled as a complex network of populations, where the links are given by a random asymmetric matrix J, with fraction 1-C of zero entries, where C reflects the over-all connectivity of the system. The…

Biological Physics · Physics 2015-12-31 Anshul Choudhary , Sudeshna Sinha

A growing number of researchers are conducting randomized experiments to analyze causal relationships in network settings where units influence one another. A dominant methodology for analyzing these experiments is design-based, leveraging…

Methodology · Statistics 2024-07-30 Ambarish Chattopadhyay , Kosuke Imai , Jose R. Zubizarreta

We present a physically-inspired model and an efficient algorithm to infer hierarchical rankings of nodes in directed networks. It assigns real-valued ranks to nodes rather than simply ordinal ranks, and it formalizes the assumption that…

Physics and Society · Physics 2018-06-14 Caterina De Bacco , Daniel B. Larremore , Cristopher Moore

Network autocorrelation models have been widely used for decades to model the joint distribution of the attributes of a network's actors. This class of models can estimate both the effect of individual characteristics as well as the network…

Methodology · Statistics 2020-05-20 Daniel K. Sewell

Ecosystems are formed by networks of species and their interactions. Traditional models of such interactions assume a constant interaction strength between a given pair of species. However, there is often significant trait variation among…

Populations and Evolution · Quantitative Biology 2022-05-03 Zachary Jackson , BingKan Xue

Across the sciences, the statistical analysis of networks is central to the production of knowledge on relational phenomena. Because of their ability to model the structural generation of networks, exponential random graph models are a…

Data Analysis, Statistics and Probability · Physics 2015-05-27 Bruce A. Desmarais , Skyler J. Cranmer

In many real-world scenarios, it is nearly impossible to collect explicit social network data. In such cases, whole networks must be inferred from underlying observations. Here, we formulate the problem of inferring latent social networks…

Social and Information Networks · Computer Science 2010-10-28 Seth A. Myers , Jure Leskovec

A new model ecosystem consisting of many interacting species is introduced. The species are connected through a random matrix with a given connectivity. It is shown that the system is organized close to a boundary of marginal stability in…

adap-org · Physics 2007-05-23 Ricard V. Sole , David Alonso , Alan McKane

Predator-prey networks originating from different aqueous and terrestrial environments are compared to assess if the difference in environments of these networks produce any significant difference in the structure of such predator-prey…

Populations and Evolution · Quantitative Biology 2019-01-11 Shashankaditya Upadhyay , Sudeepto Bhattacharya

To infer a diffusion network based on observations from historical diffusion processes, existing approaches assume that observation data contain exact occurrence time of each node infection, or at least the eventual infection statuses of…

Social and Information Networks · Computer Science 2023-12-14 Hao Huang , Qian Yan , Keqi Han , Ting Gan , Jiawei Jiang , Quanqing Xu , Chuanhui Yan

Real-world complex systems such as ecological communities and neuron networks are essential parts of our everyday lives. These systems are composed of units which interact through intricate networks. The ability to predict sudden changes in…

Adaptation and Self-Organizing Systems · Physics 2019-07-05 Deniz Eroglu , Matteo Tanzi , Sebastian van Strien , Tiago Pereira

Spatial ecological networks are widely used to model interactions between georeferenced biological entities (e.g., populations or communities). The analysis of such data often leads to a two-step approach where groups containing similar…

Applications · Statistics 2014-02-24 Vincent Miele , Franck Picard , Stéphane Dray

We study a model ecosystem by means of dynamical techniques from disordered systems theory. The model describes a set of species subject to competitive interactions through a background of resources, which they feed upon. Additionally…

Populations and Evolution · Quantitative Biology 2009-11-13 Yoshimi Yoshino , Tobias Galla , Kei Tokita