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Biclustering is an unsupervised machine-learning approach aiming to cluster rows and columns simultaneously in a data matrix. Several biclustering algorithms have been proposed for handling numeric datasets. However, real-world data mining…

Machine Learning · Computer Science 2024-08-26 Adán José-García , Julie Jacques , Clément Chauvet , Vincent Sobanski , Clarisse Dhaenens

In several application domains, high-dimensional observations are collected and then analysed in search for naturally occurring data clusters which might provide further insights about the nature of the problem. In this paper we describe a…

Machine Learning · Statistics 2012-03-07 Brian McWilliams , Giovanni Montana

We present an accelerated algorithm for hierarchical density based clustering. Our new algorithm improves upon HDBSCAN*, which itself provided a significant qualitative improvement over the popular DBSCAN algorithm. The accelerated HDBSCAN*…

Machine Learning · Statistics 2018-12-20 Leland McInnes , John Healy

This paper describes the incremental behaviours of Density based clustering. It specially focuses on the Density Based Spatial Clustering of Applications with Noise (DBSCAN) algorithm and its incremental approach.DBSCAN relies on a density…

Databases · Computer Science 2014-06-19 Sanjay Chakraborty , N. K. Nagwani

Clustering is one of the most widely used procedures in the analysis of microarray data, for example with the goal of discovering cancer subtypes based on observed heterogeneity of genetic marks between different tissues. It is well-known…

Methodology · Statistics 2009-04-21 Heng Lian

To cluster data is to separate samples into distinctive groups that should ideally have some cohesive properties. Today, numerous clustering algorithms exist, and their differences lie essentially in what can be perceived as ``cohesive…

Machine Learning · Statistics 2025-05-08 Louis Ohl , Pierre-Alexandre Mattei , Frédéric Precioso

The advent of the big data paradigm has transformed how industries manage and analyze information, ushering in an era of unprecedented data volume, velocity, and variety. Within this landscape, mixed-data clustering has become a critical…

Machine Learning · Computer Science 2025-12-04 Guillaume Guerard , Sonia Djebali

Clustering is an important tool for data exploration where the goal is to subdivide a data set into disjoint clusters that fit well into the underlying data structure. When dealing with sensitive data, privacy-preserving algorithms aim to…

Cryptography and Security · Computer Science 2024-08-21 Johannes Liebenow , Yara Schütt , Tanya Braun , Marcel Gehrke , Florian Thaeter , Esfandiar Mohammadi

We propose a novel method for multiple clustering that assumes a co-clustering structure (partitions in both rows and columns of the data matrix) in each view. The new method is applicable to high-dimensional data. It is based on a…

One potential solution to combat the scarcity of tail observations in extreme value analysis is to integrate information from multiple datasets sharing similar tail properties, for instance, a common extreme value index. In other words, for…

Methodology · Statistics 2025-06-25 Liujun Chen , Marco Oesting , Chen Zhou

Mean shift clustering finds the modes of the data probability density by identifying the zero points of the density gradient. Since it does not require to fix the number of clusters in advance, the mean shift has been a popular clustering…

Machine Learning · Statistics 2014-04-22 Hiroaki Sasaki , Aapo Hyvärinen , Masashi Sugiyama

In high-dimension, low-sample size (HDLSS) data, it is not always true that closeness of two objects reflects a hidden cluster structure. We point out the important fact that it is not the closeness, but the "values" of distance that…

Machine Learning · Statistics 2013-12-30 Yoshikazu Terada

Determining phenotypes of diseases can have considerable benefits for in-hospital patient care and to drug development. The structure of high dimensional data sets such as electronic health records are often represented through an embedding…

Currently, data-driven discovery in biological sciences resides in finding segmentation strategies in multivariate data that produce sensible descriptions of the data. Clustering is but one of several approaches and sometimes falls short…

Quantitative Methods · Quantitative Biology 2022-08-12 Richard Tjörnhammar

Detecting arbitrarily shaped clusters in high-dimensional noisy data is challenging for current clustering methods. We introduce SHADE (Structure-preserving High-dimensional Analysis with Density-based Exploration), the first deep…

Machine Learning · Computer Science 2024-10-10 Anna Beer , Pascal Weber , Lukas Miklautz , Collin Leiber , Walid Durani , Christian Böhm , Claudia Plant

We develop a new density-based clustering algorithm named CRAD which is based on a new neighbor searching function with a robust data depth as the dissimilarity measure. Our experiments prove that the new CRAD is highly competitive at…

Computation · Statistics 2019-04-09 Xin Huang , Yulia R. Gel

Modes and ridges of the probability density function behind observed data are useful geometric features. Mode-seeking clustering assigns cluster labels by associating data samples with the nearest modes, and estimation of density ridges…

Machine Learning · Statistics 2018-04-03 Hiroaki Sasaki , Takafumi Kanamori , Aapo Hyvärinen , Gang Niu , Masashi Sugiyama

We introduce a density-based clustering method called skeleton clustering that can detect clusters in multivariate and even high-dimensional data with irregular shapes. To bypass the curse of dimensionality, we propose surrogate density…

Machine Learning · Statistics 2023-03-09 Zeyu Wei , Yen-Chi Chen

Clustering multidimensional points is a fundamental data mining task, with applications in many fields, such as astronomy, neuroscience, bioinformatics, and computer vision. The goal of clustering algorithms is to group similar objects…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-22 Yihao Huang , Shangdi Yu , Julian Shun

Clustering methods are a valuable tool for the identification of patterns in high dimensional data with applications in many scientific problems. However, quantifying uncertainty in clustering is a challenging problem, particularly when…

Methodology · Statistics 2018-06-01 Marcio Valk , Gabriela Bettella Cybis