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Graph are a ubiquitous data representation, as they represent a flexible and compact representation. For instance, the 3D structure of RNA can be efficiently represented as $\textit{2.5D graphs}$, graphs whose nodes are nucleotides and…

Machine Learning · Computer Science 2021-09-21 Vincent Mallet , Carlos G. Oliver , William L. Hamilton

Graph matching is a challenging problem with very important applications in a wide range of fields, from image and video analysis to biological and biomedical problems. We propose a robust graph matching algorithm inspired in…

Optimization and Control · Mathematics 2013-11-26 Marcelo Fiori , Pablo Sprechmann , Joshua Vogelstein , Pablo Musé , Guillermo Sapiro

A number of popular systems, most notably Google's TensorFlow, have been implemented from the ground up to support machine learning tasks. We consider how to make a very small set of changes to a modern relational database management system…

Databases · Computer Science 2019-04-26 Dimitrije Jankov , Shangyu Luo , Binhang Yuan , Zhuhua Cai , Jia Zou , Chris Jermaine , Zekai J. Gao

Fast, incremental evolution of physics instrumentation raises the question of efficient software abstraction and transferability of algorithms across similar technologies. This contribution aims to provide an answer by introducing Track…

Instrumentation and Detectors · Physics 2024-01-08 Petr Mánek , Petr Burian , Eric David-Bosne , Petr Smolyanskiy , Benedikt Bergmann

Graph-level anomaly detection (GLAD) is crucial for ensuring the reliability of graph-driven applications by identifying abnormal graphs that deviate from the majority. Considering the privacy concerns in distributed scenarios, federated…

Machine Learning · Computer Science 2026-05-12 Yunfeng Zhao , Yixin Liu , Qingfeng Chen , Shiyuan Li , Yue Tan , Shirui Pan

Federated learning is an emerging paradigm for decentralized training of machine learning models on distributed clients, without revealing the data to the central server. Most existing works have focused on horizontal or vertical data…

Machine Learning · Computer Science 2024-04-16 Jaeyeon Jang , Diego Klabjan , Veena Mendiratta , Fanfei Meng

Graph-based retrieval-augmented generation (RAG) enables large language models (LLMs) to incorporate structured knowledge via graph retrieval as contextual input, enhancing more accurate and context-aware reasoning. We observe that for…

Machine Learning · Computer Science 2025-05-20 Qiuyu Zhu , Liang Zhang , Qianxiong Xu , Cheng Long , Jie Zhang

Hypersparse matrices are a powerful enabler for a variety of network, health, finance, and social applications. Hierarchical hypersparse GraphBLAS matrices enable rapid streaming updates while preserving algebraic analytic power and…

We consider data structures for graphs where we maintain a subset of the nodes called sites, and allow proximity queries, such as asking for the closest site to a query node, and update operations that enable or disable nodes as sites. We…

Data Structures and Algorithms · Computer Science 2020-01-07 David Eppstein , Michael T. Goodrich , Nil Mamano

Coarse-Grained Reconfigurable Arrays (CGRA) are promising edge accelerators due to the outstanding balance in flexibility, performance, and energy efficiency. Classic CGRAs statically map compute operations onto the processing elements (PE)…

Hardware Architecture · Computer Science 2023-09-20 Dan Wu , Peng Chen , Thilini Kaushalya Bandara , Zhaoying Li , Tulika Mitra

We present a novel method for graph partitioning, based on reinforcement learning and graph convolutional neural networks. Our approach is to recursively partition coarser representations of a given graph. The neural network is implemented…

Machine Learning · Computer Science 2021-06-30 Alice Gatti , Zhixiong Hu , Tess Smidt , Esmond G. Ng , Pieter Ghysels

Recent advances in Retrieval-Augmented Generation (RAG) have revolutionized knowledge-intensive tasks, yet traditional RAG methods struggle when the search space is unknown or when documents are semi-structured or structured. We introduce a…

Information Retrieval · Computer Science 2026-03-25 Manie Tadayon , Mayank Gupta

When facing graph signal processing tasks, the workhorse assumption is that the graph describing the support of the signals is known. However, in many relevant applications the available graph suffers from observation errors and…

Signal Processing · Electrical Eng. & Systems 2024-12-03 Samuel Rey , Victor M. Tenorio , Antonio G. Marques

Non-local operation is widely explored to model the long-range dependencies. However, the redundant computation in this operation leads to a prohibitive complexity. In this paper, we present a Representative Graph (RepGraph) layer to…

Computer Vision and Pattern Recognition · Computer Science 2020-08-13 Changqian Yu , Yifan Liu , Changxin Gao , Chunhua Shen , Nong Sang

Relational data stored in RDBMS is foundational to many real-world applications across domains such as e-commerce, finance, and sociality. While deep neural networks (DNNs) have achieved strong performance on tabular data with a single…

Databases · Computer Science 2026-05-15 Lingze Zeng , Shaofeng Cai , Changshuo Liu , Zhongle Xie , Yuncheng Wu , Beng Chin Ooi

Graph data management (also called NoSQL) has revealed beneficial characteristics in terms of flexibility and scalability by differently balancing between query expressivity and schema flexibility. This peculiar advantage has resulted into…

Databases · Computer Science 2019-09-10 Harsh Thakkar , Dharmen Punjani , Soeren Auer , Maria-Esther Vidal

Dynamic recommendation, focusing on modeling user preference from historical interactions and providing recommendations on current time, plays a key role in many personalized services. Recent works show that pre-trained dynamic graph neural…

Social and Information Networks · Computer Science 2025-11-18 Zhen Tao , Yuehang Cao , Yang Fang , Yunhui Liu , Xiang Zhao , Tieke He

In this paper we raise the question of how to compress sparse graphs. By introducing the idea of redundancy, we find a way to measure the overlap of neighbors between nodes in networks. We exploit symmetry and information by making use of…

Statistical Mechanics · Physics 2015-04-01 Jie Sun , Erik M. Bollt , Daniel ben-Avraham

Dynamic graphs, featuring continuously updated vertices and edges, have grown in importance for numerous real-world applications. To accommodate this, graph frameworks, particularly their internal data structures, must support both…

Data Structures and Algorithms · Computer Science 2024-03-06 Abdullah Al Raqibul Islam , Dong Dai

We present a general graph-based modeling abstraction for optimization that we call an OptiGraph. Under this abstraction, any optimization problem is treated as a hierarchical hypergraph in which nodes represent optimization subproblems and…

Optimization and Control · Mathematics 2026-05-11 Jordan Jalving , Sungho Shin , Victor M. Zavala