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This paper addresses the challenge of out-of-distribution (OOD) generalization in graph machine learning, a field rapidly advancing yet grappling with the discrepancy between source and target data distributions. Traditional graph learning…

Machine Learning · Computer Science 2024-08-09 Xin Sun , Liang Wang , Qiang Liu , Shu Wu , Zilei Wang , Liang Wang

A popular method of force-directed graph drawing is multidimensional scaling using graph-theoretic distances as input. We present an algorithm to minimize its energy function, known as stress, by using stochastic gradient descent (SGD) to…

Computational Geometry · Computer Science 2018-06-29 Jonathan X. Zheng , Samraat Pawar , Dan F. M. Goodman

We study the problem of maximizing the number of spanning trees in a connected graph by adding at most $k$ edges from a given candidate edge set. We give both algorithmic and hardness results for this problem: - We give a greedy algorithm…

Data Structures and Algorithms · Computer Science 2018-07-17 Huan Li , Stacy Patterson , Yuhao Yi , Zhongzhi Zhang

We present a new way of constructing an ensemble classifier, named the Guided Random Forest (GRAF) in the sequel. GRAF extends the idea of building oblique decision trees with localized partitioning to obtain a global partitioning. We show…

Machine Learning · Computer Science 2025-08-08 Prashant Gupta , Aashi Jindal , Jayadeva , Debarka Sengupta

Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

Given a query graph that represents a pattern of interest, the emerging pattern detection problem can be viewed as a continuous query problem on a dynamic graph. We present an incremental algorithm for continuous query processing on dynamic…

Databases · Computer Science 2014-07-15 Sutanay Choudhury , Lawrence Holder , George Chin , Patrick Mackey , Khushbu Agarwal , John Feo

Neural networks for structured data like graphs have been studied extensively in recent years. To date, the bulk of research activity has focused mainly on static graphs. However, most real-world networks are dynamic since their topology…

Machine Learning · Computer Science 2020-03-03 Changmin Wu , Giannis Nikolentzos , Michalis Vazirgiannis

Evolving trees arise in many real-life scenarios from computer file systems and dynamic call graphs, to fake news propagation and disease spread. Most layout algorithms for static trees do not work well in an evolving setting (e.g., they…

Computational Geometry · Computer Science 2022-08-29 Kathryn Gray , Mingwei Li , Reyan Ahmed , Stephen Kobourov

Algorithms which compute properties over graphs have always been of interest in computer science, with some of the fundamental algorithms, such as Dijkstra's algorithm, dating back to the 50s. Since the 70s there as been interest in…

Data Structures and Algorithms · Computer Science 2017-10-31 Daniel P. Martin

This paper focuses on finding a spanning tree of a graph to maximize the number of its internal vertices. We present an approximation algorithm for this problem which can achieve a performance ratio $\frac{4}{3}$ on undirected simple…

Data Structures and Algorithms · Computer Science 2014-09-15 Xingfu Li , Daming Zhu

Dynamic programming is a powerful technique that is, unfortunately, often inherently sequential. That is, there exists no unified method to parallelize algorithms that use dynamic programming. In this paper, we attempt to address this issue…

Data Structures and Algorithms · Computer Science 2018-09-18 MohammadHossein Bateni , Soheil Behnezhad , Mahsa Derakhshan , MohammadTaghi Hajiaghayi , Vahab Mirrokni

We solve the subgraph isomorphism problem in planar graphs in linear time, for any pattern of constant size. Our results are based on a technique of partitioning the planar graph into pieces of small tree-width, and applying dynamic…

Data Structures and Algorithms · Computer Science 2007-05-23 David Eppstein

We provide a novel approach to construct generative models for graphs. Instead of using the traditional probabilistic models or deep generative models, we propose to instead find an algorithm that generates the data. We achieve this using…

Machine Learning · Computer Science 2023-04-26 Mihai Babiac , Karolis Martinkus , Roger Wattenhofer

Continuing in the steps of Jon Kleinberg's and others celebrated work on decentralized search in small-world networks, we conduct an experimental analysis of a dynamic algorithm that produces small-world networks. We find that the algorithm…

Data Structures and Algorithms · Computer Science 2008-04-08 Olof Mogren , Oskar Sandberg , Vilhelm Verendel , Devdatt Dubhashi

In this paper, we investigate the $k$-path coloring problem, a variant of vertex coloring arising in the context of integrated circuit manufacturing. In this setting, typical industrial instances exhibit a `tree-like' structure. We exploit…

Discrete Mathematics · Computer Science 2019-04-29 Dehia Ait-Ferhat , Vincent Juliard , Gautier Stauffer , Andres Torres

Graph-structured data arise naturally in many different application domains. By representing data as graphs, we can capture entities (i.e., nodes) as well as their relationships (i.e., edges) with each other. Many useful insights can be…

Artificial Intelligence · Computer Science 2018-07-24 John Boaz Lee , Ryan A. Rossi , Sungchul Kim , Nesreen K. Ahmed , Eunyee Koh

It is well known that directed treewidth does not enjoy the nice algorithmic properties of its undirected counterpart. There exist, however, some positive results that, essentially, present XP algorithms for the problem of finding, in a…

Data Structures and Algorithms · Computer Science 2025-08-20 Raul Lopes , Ignasi Sau

The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

An induced forest of a graph G is an acyclic induced subgraph of G. The present paper is devoted to the analysis of a simple randomised algorithm that grows an induced forest in a regular graph. The expected size of the forest it outputs…

Combinatorics · Mathematics 2007-09-21 Carlos Hoppen , Nicholas Wormald

We consider the problem of searching for a node on a labelled random graph according to a greedy algorithm that selects a route to the desired node using metric information on the graph. Motivated by peer-to-peer networks two types of…

Statistical Mechanics · Physics 2013-05-29 David Lancaster