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This paper introduces a network for volumetric segmentation that learns from sparsely annotated volumetric images. We outline two attractive use cases of this method: (1) In a semi-automated setup, the user annotates some slices in the…

Computer Vision and Pattern Recognition · Computer Science 2016-06-22 Özgün Çiçek , Ahmed Abdulkadir , Soeren S. Lienkamp , Thomas Brox , Olaf Ronneberger

As the world progresses in technology and health, awareness of disease by revealing asymptomatic signs improves. It is important to detect and treat tumors in early stage as it can be life-threatening. Computer-aided technologies are used…

Image and Video Processing · Electrical Eng. & Systems 2023-07-27 Roa'a Al-Emaryeen , Sara Al-Nahhas , Fatima Himour , Waleed Mahafza , Omar Al-Kadi

Intra-operative ultrasound is an increasingly important imaging modality in neurosurgery. However, manual interaction with imaging data during the procedures, for example to select landmarks or perform segmentation, is difficult and can be…

Computer Vision and Pattern Recognition · Computer Science 2019-04-19 Julia Rackerseder , Rüdiger Göbl , Nassir Navab , Christoph Hennersperger

In recent years Deep Learning has brought about a breakthrough in Medical Image Segmentation. U-Net is the most prominent deep network in this regard, which has been the most popular architecture in the medical imaging community. Despite…

Computer Vision and Pattern Recognition · Computer Science 2019-09-17 Nabil Ibtehaz , M. Sohel Rahman

Breast tumor segmentation is one of the key steps that helps us characterize and localize tumor regions. However, variable tumor morphology, blurred boundary, and similar intensity distributions bring challenges for accurate segmentation of…

Image and Video Processing · Electrical Eng. & Systems 2024-01-23 Gongping Chen , Lei Li , JianXun Zhang , Yu Dai

Since the advent of U-Net, fully convolutional deep neural networks and its many variants have completely changed the modern landscape of deep learning based medical image segmentation. However, the over dependence of these methods on pixel…

Image and Video Processing · Electrical Eng. & Systems 2021-01-20 Simon Bohlender , Ilkay Oksuz , Anirban Mukhopadhyay

Medical images often exhibit low and blurred contrast between lesions and surrounding tissues, with considerable variation in lesion edges and shapes even within the same disease, leading to significant challenges in segmentation.…

Image and Video Processing · Electrical Eng. & Systems 2025-02-12 Wang Jiangtao , Nur Intan Raihana Ruhaiyem , Fu Panpan

Ultrasound tongue imaging (UTI) is a non-invasive and cost-effective tool for studying speech articulation, motor control, and related disorders. However, real-time tongue contour segmentation remains challenging due to low signal-to-noise…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Alisher Myrgyyassov , Zhen Song , Yu Sun , Bruce Xiao Wang , Min Ney Wong , Yongping Zheng

Deep learning has shown great promise in the ability to automatically annotate organs in magnetic resonance imaging (MRI) scans, for example, of the brain. However, despite advancements in the field, the ability to accurately segment…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Cosmin Ciausu , Deepa Krishnaswamy , Benjamin Billot , Steve Pieper , Ron Kikinis , Andrey Fedorov

Automatic segmentation of anatomical landmarks from ultrasound (US) plays an important role in the management of preterm neonates with a very low birth weight due to the increased risk of developing intraventricular hemorrhage (IVH) or…

Image and Video Processing · Electrical Eng. & Systems 2019-12-19 Jeya Maria Jose V. , Rajeev Yasarla , Puyang Wang , Ilker Hacihaliloglu , Vishal M. Patel

Medical image segmentation is an important step in medical image analysis, especially as a crucial prerequisite for efficient disease diagnosis and treatment. The use of deep learning for image segmentation has become a prevalent trend. The…

Image and Video Processing · Electrical Eng. & Systems 2023-08-11 Wenjian Yao , Jiajun Bai , Wei Liao , Yuheng Chen , Mengjuan Liu , Yao Xie

In this paper, we propose a bottleneck supervised (BS) U-Net model for liver and tumor segmentation. Our main contributions are: first, we propose a variation of the original U-Net that incorporates dense modules, inception modules and…

Computer Vision and Pattern Recognition · Computer Science 2019-03-14 Song Li , Geoffrey Kwok Fai Tso

Despite the success of convolutional neural networks for 3D medical-image segmentation, the architectures currently used are still not robust enough to the protocols of different scanners, and the variety of image properties they produce.…

Image and Video Processing · Electrical Eng. & Systems 2022-10-31 Shrajan Bhandary , Zahra Babaiee , Dejan Kostyszyn , Tobias Fechter , Constantinos Zamboglou , Anca-Ligia Grosu , Radu Grosu

We propose using a pre-trained segmentation model to perform diagnostic classification in order to achieve better generalization and interpretability, terming the technique reverse-transfer learning. We present an architecture to convert…

Image and Video Processing · Electrical Eng. & Systems 2022-01-26 Gautam Rajendrakumar Gare , Andrew Schoenling , Vipin Philip , Hai V Tran , Bennett P deBoisblanc , Ricardo Luis Rodriguez , John Michael Galeotti

Image segmentation is a primary task in many medical applications. Recently, many deep networks derived from U-Net have been extensively used in various medical image segmentation tasks. However, in most of the cases, networks similar to…

Computer Vision and Pattern Recognition · Computer Science 2019-08-15 Balamurali Murugesan , Kaushik Sarveswaran , Sharath M Shankaranarayana , Keerthi Ram , Mohanasankar Sivaprakasam

Accurate segmentation of different sub-regions of gliomas including peritumoral edema, necrotic core, enhancing and non-enhancing tumor core from multimodal MRI scans has important clinical relevance in diagnosis, prognosis and treatment of…

Computer Vision and Pattern Recognition · Computer Science 2018-12-05 Xue Feng , Nicholas Tustison , Craig Meyer

Magnetic Resonance Imaging (MRI) is the most commonly used non-intrusive technique for medical image acquisition. Brain tumor segmentation is the process of algorithmically identifying tumors in brain MRI scans. While many approaches have…

Image and Video Processing · Electrical Eng. & Systems 2022-11-04 Jason Walsh , Alice Othmani , Mayank Jain , Soumyabrata Dev

Ureteroscopy is becoming the first surgical treatment option for the majority of urinary affections. This procedure is performed using an endoscope which provides the surgeon with the visual information necessary to navigate inside the…

Image and Video Processing · Electrical Eng. & Systems 2021-01-14 Jorge F. Lazo , Aldo Marzullo , Sara Moccia , Michele Catellani , Benoit Rosa , Michel de Mathelin , Elena De Momi

Ultrasound imaging is a commonly used technology for visualising patient anatomy in real-time during diagnostic and therapeutic procedures. High operator dependency and low reproducibility make ultrasound imaging and interpretation…

Deep learning based approaches are now widely used across biophysics to help automate a variety of tasks including image segmentation, feature selection, and deconvolution. However, the presence of multiple competing deep learning…

Image and Video Processing · Electrical Eng. & Systems 2025-01-31 J Shepard Bryan , Pedro Pessoa , Meyam Tavakoli , Steve Presse