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Gaussian Graphical Models (GGMs) are popular tools for studying network structures. However, many modern applications such as gene network discovery and social interactions analysis often involve high-dimensional noisy data with outliers or…

Machine Learning · Statistics 2015-10-30 Eunho Yang , Aurélie C. Lozano

Network inference has been extensively studied in several fields, such as systems biology and social sciences. Learning network topology and internal dynamics is essential to understand mechanisms of complex systems. In particular, sparse…

Machine Learning · Statistics 2022-06-13 Yasen Wang , Junyang Jin , Jorge Goncalves

Graphical models have exhibited their performance in numerous tasks ranging from biological analysis to recommender systems. However, graphical models with hub nodes are computationally difficult to fit, particularly when the dimension of…

Optimization and Control · Mathematics 2025-05-05 Chengjing Wang , Peipei Tang , Wenling He , Meixia Lin

Network analysis has played a key role in knowledge discovery and data mining. In many real-world applications in recent years, we are interested in mining multilayer networks, where we have a number of edge sets called layers, which encode…

Social and Information Networks · Computer Science 2022-11-08 Yasushi Kawase , Atsushi Miyauchi , Hanna Sumita

Graph embedding is gaining its popularity for link prediction in complex networks and achieving excellent performance. However, limited work has been done in sparse networks that represent most of real networks. In this paper, we propose a…

Social and Information Networks · Computer Science 2021-04-22 Min-Ren Chen , Ping Huang , Yu Lin , Shi-Min Cai

Networks serve as a tool used to examine the large-scale connectivity patterns in complex systems. Modelling their generative mechanism nonparametrically is often based on step-functions, such as the stochastic block models. These models…

Methodology · Statistics 2024-01-11 Arthur Verdeyme , Sofia C. Olhede

We consider the problem of estimating the parameters of a Gaussian or binary distribution in such a way that the resulting undirected graphical model is sparse. Our approach is to solve a maximum likelihood problem with an added l_1-norm…

Artificial Intelligence · Computer Science 2007-07-06 Onureena Banerjee , Laurent El Ghaoui , Alexandre d'Aspremont

In genomic analysis, biomarker discovery, image recognition, and other systems involving machine learning, input variables can often be organized into different groups by their source or semantic category. Eliminating some groups of…

Machine Learning · Computer Science 2019-12-02 Beibin Li , Nicholas Nuechterlein , Erin Barney , Caitlin Hudac , Pamela Ventola , Linda Shapiro , Frederick Shic

This research establishes that many real-world networks exhibit bounded expansion, a strong notion of structural sparsity, and demonstrates that it can be leveraged to design efficient algorithms for network analysis. We analyze several…

Social and Information Networks · Computer Science 2018-10-15 Erik D. Demaine , Felix Reidl , Peter Rossmanith , Fernando Sanchez Villaamil , Somnath Sikdar , Blair D. Sullivan

This paper introduces a new methodology to analyse bipartite and unipartite networks with nonnegative edge values. The proposed approach combines and adapts a number of ideas from the literature on latent variable network models. The…

Methodology · Statistics 2018-08-29 Riccardo Rastelli

Link prediction is a fundamental problem in graph theory with diverse applications, including recommender systems, community detection, and identifying spurious connections. While feature-based methods achieve high accuracy, their reliance…

Social and Information Networks · Computer Science 2025-01-14 Mehrdad Rafiepour , S. Mehdi Vahidipour

Functional brain networks are well described and estimated from data with Gaussian Graphical Models (GGMs), e.g. using sparse inverse covariance estimators. Comparing functional connectivity of subjects in two populations calls for…

Machine Learning · Statistics 2016-11-21 Eugene Belilovsky , Gaël Varoquaux , Matthew B. Blaschko

Much work has been done recently to make neural networks more interpretable, and one obvious approach is to arrange for the network to use only a subset of the available features. In linear models, Lasso (or $\ell_1$-regularized) regression…

Machine Learning · Statistics 2021-06-17 Ismael Lemhadri , Feng Ruan , Louis Abraham , Robert Tibshirani

Graphical network inference is used in many fields such as genomics or ecology to infer the conditional independence structure between variables, from measurements of gene expression or species abundances for instance. In many practical…

Methodology · Statistics 2018-03-22 Geneviève Robin , Christophe Ambroise , Stéphane Robin

Deep neural networks achieve state-of-the-art performance in a variety of tasks by extracting a rich set of features from unstructured data, however this performance is closely tied to model size. Modern techniques for inducing sparsity and…

Machine Learning · Computer Science 2021-03-02 Skyler Seto , Martin T. Wells , Wenyu Zhang

We introduce a novel Bayesian approach for both covariate selection and sparse precision matrix estimation in the context of high-dimensional Gaussian graphical models involving multiple responses. Our approach provides a sparse estimation…

Methodology · Statistics 2024-09-25 Anwesha Chakravarti , Naveen N. Narishetty , Feng Liang

We propose a novel statistical model for sparse networks with overlapping community structure. The model is based on representing the graph as an exchangeable point process, and naturally generalizes existing probabilistic models with…

Methodology · Statistics 2025-02-06 Adrien Todeschini , Xenia Miscouridou , François Caron

Most empirical studies of networks assume that the network data we are given represent a complete and accurate picture of the nodes and edges in the system of interest, but in real-world situations this is rarely the case. More often the…

Social and Information Networks · Computer Science 2019-01-02 M. E. J. Newman

We consider a distributed learning setup where a sparse signal is estimated over a network. Our main interest is to save communication resource for information exchange over the network and reduce processing time. Each node of the network…

Machine Learning · Statistics 2018-04-03 Ahmed Zaki , Saikat Chatterjee , Partha P. Mitra , Lars K. Rasmussen

Increasing attention has recently been given to the inference of sparse networks. In biology, for example, most molecules only bind to a small number of other molecules, leading to sparse molecular interaction networks. To achieve…

Systems and Control · Computer Science 2019-01-04 J. Jin , Y. Yuan , A. Webb , J. Goncalves