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Network and system security are incredibly critical issues now. Due to the rapid proliferation of malware, traditional analysis methods struggle with enormous samples. In this paper, we propose four easy-to-extract and small-scale features,…

Cryptography and Security · Computer Science 2022-01-20 Zhenshuo Chen , Eoin Brophy , Tomas Ward

There is a growing awareness of the important roles that microbial communities play in complex biological processes. Modern investigation of these often uses next generation sequencing of metagenomic samples to determine community…

Applications · Statistics 2018-01-25 Adrian Dobra , Camilo Valdes , Dragana Ajdic , Bertrand Clarke , Jennifer Clarke

High-dimensional linear classifiers, such as the support vector machine (SVM) and distance weighted discrimination (DWD), are commonly used in biomedical research to distinguish groups of subjects based on a large number of features.…

Methodology · Statistics 2017-10-20 Tianmeng Lyu , Eric F. Lock , Lynn E. Eberly

Obtaining effective representations of DNA sequences is crucial for genome analysis. Metagenomic binning, for instance, relies on genome representations to cluster complex mixtures of DNA fragments from biological samples with the aim of…

Machine Learning · Computer Science 2024-11-05 Abdulkadir Celikkanat , Andres R. Masegosa , Thomas D. Nielsen

The conventional approach for analyzing gene expression data involves clustering algorithms. Cluster analyses provide partitioning of the set of genes that can predict biological classification based on its similarity in n-dimensional…

Molecular Networks · Quantitative Biology 2022-08-23 Jhoirene B. Clemente , Gabriel Besas , Jerick Callado , John Erol Evangelista

We present a weakly supervised deep learning method to perform instance segmentation of cells present in microscopy images. Annotation of biomedical images in the lab can be scarce, incomplete, and inaccurate. This is of concern when…

Computer Vision and Pattern Recognition · Computer Science 2019-08-28 Fidel A. Guerrero-Peña , Pedro D. Marrero Fernandez , Tsang Ing Ren , Alexandre Cunha

Biomedical data are widely accepted in developing prediction models for identifying a specific tumor, drug discovery and classification of human cancers. However, previous studies usually focused on different classifiers, and overlook the…

Quantitative Methods · Quantitative Biology 2019-11-05 Shigang Liu , Jun Zhang , Yang Xiang , Wanlei Zhou , Dongxi Xiang

Machine learning is widely used in developing computer-aided diagnosis (CAD) schemes of medical images. However, CAD usually computes large number of image features from the targeted regions, which creates a challenge of how to identify a…

Computer Vision and Pattern Recognition · Computer Science 2021-02-09 Morteza Heidari , Sivaramakrishnan Lakshmivarahan , Seyedehnafiseh Mirniaharikandehei , Gopichandh Danala , Sai Kiran R. Maryada , Hong Liu , Bin Zheng

In the case of malware analysis, categorization of malicious files is an essential part after malware detection. Numerous static and dynamic techniques have been reported so far for categorizing malware. This research presents a deep…

Cryptography and Security · Computer Science 2020-12-29 Muhammad Furqan Rafique , Muhammad Ali , Aqsa Saeed Qureshi , Asifullah Khan , Anwar Majid Mirza

In recent years the importance of finding a meaningful pattern from huge datasets has become more challenging. Data miners try to adopt innovative methods to face this problem by applying feature selection methods. In this paper we propose…

Machine Learning · Computer Science 2014-03-11 Mehdi Naseriparsa , Amir-masoud Bidgoli , Touraj Varaee

This technical report presents a comprehensive analysis of malware classification using OpCode sequences. Two distinct approaches are evaluated: traditional machine learning using n-gram analysis with Support Vector Machine (SVM), K-Nearest…

Cryptography and Security · Computer Science 2025-04-21 Varij Saini , Rudraksh Gupta , Neel Soni

In this paper, a novel approach for automatic segmentation and classification of skin lesions is proposed. Initially, skin images are filtered to remove unwanted hairs and noise and then the segmentation process is carried out to extract…

Computer Vision and Pattern Recognition · Computer Science 2016-09-13 Sumithra R , Mahamad Suhil , D. S. Guru

We introduce an advanced, swift pattern recognition strategy for various multiple robotics during curve negotiation. This method, leveraging a sophisticated k-means clustering-enhanced Support Vector Machine algorithm, distinctly…

Robotics · Computer Science 2024-05-07 Rui Liu , Xuanzhen Xu , Yuwei Shen , Armando Zhu , Chang Yu , Tianjian Chen , Ye Zhang

The typical process for classifying and submitting a newly sequenced virus to the NCBI database involves two steps. First, a BLAST search is performed to determine likely family candidates. That is followed by checking the candidate…

Genomics · Quantitative Biology 2016-03-22 Troy Hernandez , Jie Yang

This paper proposes a frequent pattern data mining algorithm based on support vector machine (SVM), aiming to solve the performance bottleneck of traditional frequent pattern mining algorithms in high-dimensional and sparse data…

Machine Learning · Computer Science 2024-12-23 Pochun Li

The intra- and inter-species genetic diversity of bacteria and the absence of 'reference', or the most representative, sequences of individual species present a significant challenge for sequence-based identification. The aims of this study…

Genomics · Quantitative Biology 2023-12-01 Manal Helal , Fanrong Kong , Sharon C. A. Chen , Michael Bain , Richard Christen , Vitali Sintchenko

The scarcity of labeled data often impedes the application of deep learning to the segmentation of medical images. Semi-supervised learning seeks to overcome this limitation by exploiting unlabeled examples in the learning process. In this…

Computer Vision and Pattern Recognition · Computer Science 2021-06-25 Jizong Peng , Marco Pedersoli , Christian Desrosiers

Recent studies in DNA sequence classification have leveraged sophisticated machine learning techniques, achieving notable accuracy in categorizing complex genomic data. Among these, methods such as k-mer counting have proven effective in…

Genomics · Quantitative Biology 2024-01-26 Şükrü Ozan

The presence of certain clinical dermoscopic features within a skin lesion may indicate melanoma, and automatically detecting these features may lead to more quantitative and reproducible diagnoses. We reformulate the task of classifying…

Computer Vision and Pattern Recognition · Computer Science 2019-03-28 Jeremy Kawahara , Ghassan Hamarneh

In this paper, we present a novel method for the segmentation of breast masses from mammograms exploring structured and deep learning. Specifically, using structured support vector machine (SSVM), we formulate a model that combines…

Computer Vision and Pattern Recognition · Computer Science 2014-12-08 Neeraj Dhungel , Gustavo Carneiro , Andrew P. Bradley