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The task of finding an extension to a given partial drawing of a graph while adhering to constraints on the representation has been extensively studied in the literature, with well-known results providing efficient algorithms for…

Computational Geometry · Computer Science 2023-02-21 Sujoy Bhore , Robert Ganian , Liana Khazaliya , Fabrizio Montecchiani , Martin Nöllenburg

A general novel approach mapping discrete, combinatorial, graph-theoretic problems onto ``physical'' models - namely $n$ simplexes in $n-1$ dimensions - is applied to the graph equivalence problem. It is shown to solve this long standing…

Statistical Mechanics · Physics 2007-05-23 Vladimir Gudkov , Shmuel Nussinov

Despite their popularity, many questions about the algebraic constraints imposed by linear structural equation models remain open problems. For causal discovery, two of these problems are especially important: the enumeration of the…

Statistics Theory · Mathematics 2018-07-11 Thijs van Ommen , Joris M. Mooij

Graph compression is a data analysis technique that consists in the replacement of parts of a graph by more general structural patterns in order to reduce its description length. It notably provides interesting exploration tools for the…

Data Structures and Algorithms · Computer Science 2018-07-19 Robin Lamarche-Perrin

Starting from a description of various generalized function algebras based on sequence spaces, we develop the general framework for considering linear problems with singular coefficients or non linear problems. Therefore, we prove…

Functional Analysis · Mathematics 2007-05-23 Antoine Delcroix , Maximilian F. Hasler , Stevan Pilipović , Vincent Valmorin

An Abstract Graph Machine(AGM) is an abstract model for distributed memory parallel stabilizing graph algorithms. A stabilizing algorithm starts from a particular initial state and goes through series of different state changes until it…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-29 Thejaka Amila Kanewala , Marcin Zalewski , Andrew Lumsdaine

Graph transformers have gained popularity in various graph-based tasks by addressing challenges faced by traditional Graph Neural Networks. However, the quadratic complexity of self-attention operations and the extensive layering in graph…

Machine Learning · Computer Science 2023-09-20 Reza Shirkavand , Heng Huang

The sheer sizes of modern datasets are forcing data-structure designers to consider seriously both parallel construction and compactness. To achieve those goals we need to design a parallel algorithm with good scalability and with low…

Data Structures and Algorithms · Computer Science 2017-05-02 Leo Ferres , José Fuentes-Sepúlveda , Travis Gagie , Meng He , Gonzalo Navarro

We investigate the structure of conformally rigid graphs. Graphs are conformally rigid if introducing edge weights cannot increase (decrease) the second (last) eigenvalue of the Graph Laplacian. Edge-transitive graphs and distance-regular…

Combinatorics · Mathematics 2025-06-26 João Gouveia , Stefan Steinerberger , Rekha R. Thomas

Real-world graphs naturally exhibit hierarchical or cyclical structures that are unfit for the typical Euclidean space. While there exist graph neural networks that leverage hyperbolic or spherical spaces to learn representations that embed…

Machine Learning · Computer Science 2023-09-11 Sungjun Cho , Seunghyuk Cho , Sungwoo Park , Hankook Lee , Honglak Lee , Moontae Lee

We present the first parallel fixed-parameter algorithm for subgraph isomorphism in planar graphs, bounded-genus graphs, and, more generally, all minor-closed graphs of locally bounded treewidth. Our randomized low depth algorithm has a…

Data Structures and Algorithms · Computer Science 2020-07-03 Lukas Gianinazzi , Torsten Hoefler

The Integrative Model for Parallelism (IMP) derives a task graph from a higher level description of parallel algorithms. In this note we show how task graph transformations can be used to achieve latency tolerance in the program execution.…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-11-14 Victor Eijkhout

We introduce and investigate the concept of Stratified Algebra, a new algebraic framework equipped with a layer-based structure on a vector space. We formalize a set of axioms governing intra-layer and inter-layer interactions, study their…

General Mathematics · Mathematics 2025-05-27 Stanislav Semenov

The complexity class NP of decision problems that can be solved nondeterministically in polynomial time is of great theoretical and practical importance where the notion of polynomial-time reductions between NP-problems is a key concept for…

Computational Complexity · Computer Science 2022-12-23 Hans-Jörg Kreowski , Sabine Kuske , Aaron Lye , Aljoscha Windhorst

In this paper, we introduce a new approach for drawing diagrams that have applications in software visualization. Our approach is to use a technique we call confluent drawing for visualizing non-planar diagrams in a planar way. This…

Computational Geometry · Computer Science 2007-05-23 Matthew Dickerson , David Eppstein , Michael T. Goodrich , Jeremy Meng

Automatic parallelization remains a challenging problem in software engineering, particularly in identifying code regions where loops can be safely executed in parallel on modern multi-core architectures. Traditional static analysis…

Software Engineering · Computer Science 2026-04-01 Izavan dos S. Correia , Henrique C. T. Santos , Tiago A. E. Ferreira

We present a new general theory of function-based hypergraph transformations on finite families of finite hypergraphs. A function-based hypergraph transformation formalises the action of structurally modifying hypergraphs from a family in a…

Combinatorics · Mathematics 2023-09-26 Sean Trinity Vittadello

Subgraph reconfiguration is a family of problems focusing on the reachability of the solution space in which feasible solutions are subgraphs, represented either as sets of vertices or sets of edges, satisfying a prescribed graph structure…

Data Structures and Algorithms · Computer Science 2018-03-19 Tesshu Hanaka , Takehiro Ito , Haruka Mizuta , Benjamin Moore , Naomi Nishimura , Vijay Subramanya , Akira Suzuki , Krishna Vaidyanathan

In a recent paper, we introduced the simultaneous representation problem (defined for any graph class C) and studied the problem for chordal, comparability and permutation graphs. For interval graphs, the problem is defined as follows. Two…

Data Structures and Algorithms · Computer Science 2010-09-21 Krishnam Raju Jampani , Anna Lubiw

A plane graph is said to be a rectangular graph if each of its edges can be oriented horizontal or vertical, its internal regions are four-sided and it has a rectangular enclosure. If dual of a planar graph is a rectangular graph, then the…

Combinatorics · Mathematics 2021-01-12 Vinod Kumar , Krishnendra Shekhawat