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The problems studied in this paper originate from Graph Motif, a problem introduced in 2006 in the context of biological networks. Informally speaking, it consists in deciding if a multiset of colors occurs in a connected subgraph of a…

Computational Complexity · Computer Science 2014-09-11 Romeo Rizzi , Florian Sikora

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

Social and Information Networks · Computer Science 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan

Extensive studies have been done to understand the principles behind architectures of real networks. Recently, evidences for hierarchical organization in many real networks have also been reported. Here, we present a new hierarchical model…

Other Condensed Matter · Physics 2007-05-23 J. C. Nacher , N. Ueda , M. Kanehisa , T. Akutsu

Many realistic networks are scale-free, with small characteristic path lengths, high clustering, and power law in their degree distribution. They can be obtained by dynamical networks in which a preferential attachment process takes place.…

Physics and Society · Physics 2017-03-13 Francesco Caravelli , Alioscia Hamma , Massimiliano Di Ventra

Complex networks have been characterised by their specific connectivity patterns (network motifs), but their building blocks can also be identified and described by node-motifs---a combination of local network features. One technique to…

We propose a geometric growth model for weighted scale-free networks, which is controlled by two tunable parameters. We derive exactly the main characteristics of the networks, which are partially determined by the parameters. Analytical…

Physics and Society · Physics 2011-11-09 Zhongzhi Zhang , Shuigeng Zhou , Lichao Chen , Jihong Guan , Lujun Fang , Yichao Zhang

The degree-degree correlation is important in understanding the structural organization of a network and the dynamics upon a network. Such correlation is usually measured by the assortativity coefficient $r$, with natural bounds $r \in…

Physics and Society · Physics 2017-04-26 Dan Yang , Liming Pan , Tao Zhou

Several natural and theoretical networks can be broken down into smaller portions, or subgraphs corresponding to neighborhoods. The more frequent of these neighborhoods can then be understood as motifs of the network, being therefore…

Physics and Society · Physics 2022-04-21 Guilherme S. Domingues , Eric K. Tokuda , Luciano da F. Costa

A new heuristic based on vertex invariants is developed to rapidly distinguish non-isomorphic graphs to a desired level of accuracy. The method is applied to sample subgraphs from an E.coli protein interaction network, and as a probe for…

Quantitative Methods · Quantitative Biology 2009-11-13 Kim Baskerville , Maya Paczuski

In this letter, we proposed an ungrowing scale-free network model, wherein the total number of nodes is fixed and the evolution of network structure is driven by a rewiring process only. In spite of the idiographic form of $G$, by using a…

Statistical Mechanics · Physics 2015-06-25 Yan-Bo Xie , Tao Zhou , Bing-Hong Wang

Many real world networks contain a statistically surprising number of certain subgraphs, called network motifs. In the prevalent approach to motif analysis, network motifs are detected by comparing subgraph frequencies in the original…

Social and Information Networks · Computer Science 2014-11-25 Anatol E. Wegner

The degree distributions of many real world networks follow power-laws whose exponents tend to fall between two and three. Within the framework of the Barabasi-Albert model (BA model), we explain this empirical observation by a simple fact.…

Physics and Society · Physics 2009-05-19 Shinji Tanimoto

We propose and study a model of traffic in communication networks. The underlying network has a structure that is tunable between a scale-free growing network with preferential attachments and a random growing network. To model realistic…

Networking and Internet Architecture · Computer Science 2008-06-12 Zonghua Liua , Weichuan Ma , Huan Zhang , Yin Sun , P. M. Hui

Using each node's degree as a proxy for its importance, the topological hierarchy of a complex network is introduced and quantified. We propose a simple dynamical process used to construct networks which are either maximally or minimally…

Soft Condensed Matter · Physics 2008-06-24 Ala Trusina , Sergei Maslov , Petter Minnhagen , Kim Sneppen

In this paper we study typical distances in the configuration model, when the degrees have asymptotically infinite variance. We assume that the empirical degree distribution follows a power law with exponent $\tau\in (2,3)$, up to value…

Probability · Mathematics 2017-09-20 Remco van der Hofstad , Julia Komjathy

Network architecture design is very important for the optimization of industrial networks. The type of network architecture can be divided into small-scale network and large-scale network according to its scale. Graph theory is an efficient…

Social and Information Networks · Computer Science 2022-09-20 Chao Dong , Xiaoxiong Xiong , Qiulin Xue , Zhengzhen Zhang , Kai Niu , Ping Zhang

Recent developments in graph theoretic analysis of complex networks have led to deeper understanding of brain networks. Many complex networks show similar macroscopic behaviors despite differences in the microscopic details. Probably two…

Neurons and Cognition · Quantitative Biology 2021-03-11 Moo K. Chung

The hidden variable formalism (based on the assumption of some intrinsic node parameters) turned out to be a remarkably efficient and powerful approach in describing and analyzing the topology of complex networks. Owing to one of its most…

Physics and Society · Physics 2019-08-13 Sámuel G. Balogh , Péter Pollner , Gergely Palla

Networks are a fundamental model of complex systems throughout the sciences, and network datasets are typically analyzed through lower-order connectivity patterns described at the level of individual nodes and edges. However, higher-order…

Social and Information Networks · Computer Science 2018-02-21 Austin R. Benson

It is commonly believed that real networks are scale-free and fraction of nodes $P(k)$ with degree $k$ satisfies the power law $P(k) \propto k^{-\gamma} \text{ for } k > k_{min} > 0$. Preferential attachment is the mechanism that has been…

Data Structures and Algorithms · Computer Science 2023-06-22 Raheel Anwar , Muhammad Irfan Yousuf , Muhammad Abid
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