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Scientific advancement relies on the ability to share and reproduce results. When data analysis or calculations are carried out using software written by scientists there are special challenges around code versions, quality and code…

Software Engineering · Computer Science 2025-07-09 S. Lee , C. Myers , A. Yang , T. Zhang , S. J. L. Billinge

As scientific discovery becomes increasingly data-driven, software platforms are needed to efficiently organize and disseminate data from disparate sources. This is certainly the case in the field of materials science. For example,…

Software Engineering · Computer Science 2015-11-04 Patrick Huck , Anubhav Jain , Dan Gunter , Donald Winston , Kristin Persson

Getting the best performance from the ever-increasing number of hardware platforms has been a recurring challenge for data processing systems. In recent years, the advent of data science with its increasingly numerous and complex types of…

This paper describes an information system designed to support the large volume of monitoring information generated by a distributed testbed. This monitoring information is produced by several subsystems and consists of status and…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-12-13 Warren Smith , Shava Smallen

A composable infrastructure is defined as resources, such as compute, storage, accelerators and networking, that are shared in a pool and that can be grouped in various configurations to meet application requirements. This freedom to 'mix…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-22 Kauotar El Maghraoui , Lorraine M. Herger , Chekuri Choudary , Kim Tran , Todd Deshane , David Hanson

In this paper we describe the main features of the software package named FITSH, intended to provide a standalone environment for analysis of data acquired by imaging astronomical detectors. The package provides utilities both for the full…

Instrumentation and Methods for Astrophysics · Physics 2015-06-03 András Pál

Compositional data analysis is concerned with multivariate data that have a constant sum, usually 1 or 100\%. These are data often found in biochemistry and geochemistry, but also in the social sciences, when relative values are of interest…

Methodology · Statistics 2021-10-26 Michael Greenacre

This article discusses the use of digital twins for products made of polymer composite materials. The design of new products from polymer composite materials, both within the framework of the traditional and new direction of cloud…

Robotics · Computer Science 2021-09-14 Maksim Kubrikov , Mikhail Saramud , Angelina Petetskaya , Evgeniy Talay

Increasing quantities of scientific data are becoming readily accessible via online repositories such as those provided by Figshare and Zenodo. Geoscientific simulations in particular generate large quantities of data, with several research…

Digital Libraries · Computer Science 2016-09-22 Christian T. Jacobs , Alexandros Avdis

Machine learning (ML) models for predicting gas permeability through polymers have traditionally relied on experimental data. While these models exhibit robustness within familiar chemical domains, reliability wanes when applied to new…

Materials Science · Physics 2024-06-24 Brandon K. Phan , Kuan-Hsuan Shen , Rishi Gurnani , Huan Tran , Ryan Lively , Rampi Ramprasad

Combinatorial samplers are algorithmic schemes devised for the approximate- and exact-size generation of large random combinatorial structures, such as context-free words, various tree-like data structures, maps, tilings, RNA molecules.…

Combinatorics · Mathematics 2021-08-19 Maciej Bendkowski , Olivier Bodini , Sergey Dovgal

Program comprehension concerns the ability of an individual to make an understanding of an existing software system to extend or transform it. Software systems comprise of data that are noisy and missing, which makes program understanding…

Software Engineering · Computer Science 2019-02-05 Amir Saeidi , Jurriaan Hage , Ravi Khadka , Slinger Jansen

Proteins created by combinatorial methods in vitro are an important source of information for understanding sequence-structure-function relationships. Alignments of folded proteins from combinatorial libraries can be analyzed using methods…

Biomolecules · Quantitative Biology 2007-05-23 Jeffrey B. Endelman , Jesse D. Bloom , Christopher R. Otey , Marco Landwehr , Frances H. Arnold

Over the last few decades, researchers have made considerable efforts to make decision support more accessible for small and medium enterprises by reducing the cost of designing, developing and maintaining automated decision support…

Software Engineering · Computer Science 2025-04-07 Daniel Karapetyan

Optics, aka functional references, are classes of tools that allow composable access into compound data structures. Usually defined as programming language libraries, they provide combinators to manipulate different shapes of data such as…

Programming Languages · Computer Science 2020-02-03 Guillaume Boisseau

Combinatorial Testing (CT) tools are essential to test properly a wide range of systems (train systems, Graphical User Interfaces (GUIs), autonomous driving systems, etc). While there is an active research community working on developing CT…

Software Engineering · Computer Science 2023-01-25 Carlos Ansotegui , Eduard Torres

In this paper, we discuss the need for an integrated software stack that unites artificial intelligence (AI) and modeling and simulation (ModSim) tools to advance scientific discovery. The authors advocate for a unified AI/ModSim software…

Software Engineering · Computer Science 2024-11-15 Michael A. Heroux , Sameer Shende , Lois Curfman McInnes , Todd Gamblin , James M. Willenbring

Convex polyhedral abstractions of logic programs have been found very useful in deriving numeric relationships between program arguments in order to prove program properties and in other areas such as termination and complexity analysis. We…

Programming Languages · Computer Science 2007-12-18 Kim Henriksen , Gourinath Banda , John Gallagher

Computational micromagnetics has become an essential tool in academia and industry to support fundamental research and the design and development of devices. Consequently, computational micromagnetics is widely used in the community, and…

Computational Physics · Physics 2021-05-19 Marijan Beg , Martin Lang , Hans Fangohr

Drawing and visualisation of molecular structures are some of the most common tasks carried out in structural glycobiology, typically using various software. In this perspective article, we outline developments in the computational tools…

Quantitative Methods · Quantitative Biology 2020-10-07 Kanhaya Lal , Rafael Bermeo , Serge Pérez
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