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The increasing availability of cloud computing services for science has changed the way scientific code can be developed, deployed, and run. Many modern scientific workflows are capable of running on cloud computing resources. Consequently,…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-11 Peter Vaillancourt , Bennett Wineholt , Brandon Barker , Plato Deliyannis , Jackie Zheng , Akshay Suresh , Adam Brazier , Rich Knepper , Rich Wolski

Cloud computing has become a major approach to help reproduce computational experiments. Yet there are still two main difficulties in reproducing batch based big data analytics (including descriptive and predictive analytics) in the cloud.…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-03-13 Xin Wang , Pei Guo , Xingyan Li , Aryya Gangopadhyay , Carl E. Busart , Jade Freeman , Jianwu Wang

Provenance has been thought of a mechanism to verify a workflow and to provide workflow reproducibility. This provenance of scientific workflows has been effectively carried out in Grid based scientific workflow systems. However, recent…

Databases · Computer Science 2015-12-01 Khawar Hasham , Kamran Munir , Richard McClatchey

The drive for reproducibility in the computational sciences has provoked discussion and effort across a broad range of perspectives: technological, legislative/policy, education, and publishing. Discussion on these topics is not new, but…

Quantitative Methods · Quantitative Biology 2018-10-10 Daniel G. Hurley , Joseph Cursons , Matthew Faria , David M. Budden , Vijay Rajagopal , Edmund J. Crampin

As computational work becomes more and more integral to many aspects of scientific research, computational reproducibility has become an issue of increasing importance to computer systems researchers and domain scientists alike. Though…

Software Engineering · Computer Science 2015-03-06 Carl Boettiger

Reproducibility in the computational sciences has been stymied because of the complex and rapidly changing computational environments in which modern research takes place. While many will espouse reproducibility as a value, the challenge of…

Software Engineering · Computer Science 2018-08-07 Remi Rampin , Fernando Chirigati , Vicky Steeves , Juliana Freire

Distributed digital infrastructures for computation and analytics are now evolving towards an interconnected ecosystem allowing complex applications to be executed from IoT Edge devices to the HPC Cloud (aka the Computing Continuum, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-06 Daniel Rosendo , Alexandru Costan , Gabriel Antoniu , Patrick Valduriez

Recent reproducibility case studies have raised concerns showing that much of the deposited research has not been reproducible. One of their conclusions was that the way data repositories store research data and code cannot fully facilitate…

Digital Libraries · Computer Science 2020-06-18 Ana Trisovic , Philip Durbin , Tania Schlatter , Gustavo Durand , Sonia Barbosa , Danny Brooke , Mercè Crosas

The reproducibility of scientific experiment is vital for the advancement of disciplines based on previous work. To achieve this goal, many researchers focus on complex methodology and self-invented tools which have difficulty in practical…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-29 Feng Zhao , Xingzhi Niu , Shao-Lun Huang , Lin Zhang

The rise of AI and the economic dominance of cloud computing have created a new nexus of innovation for high performance computing (HPC), which has a long history of driving scientific discovery. In addition to performance needs, scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-10 Vanessa Sochat , Daniel Milroy , Abhik Sarkar , Aniruddha Marathe , Tapasya Patki

Complex flow simulations are conventionally performed on HPC clusters. However, the limited availability of HPC resources and steep learning curve of executing on traditional supercomputer infrastructure has drawn attention towards…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-13 Kumar Saurabh , Santi Adavani , Kendrick Tan , Masado Ishii , Boshun Gao , Adarsh Krishnamurthy , Hari Sundar , Baskar Ganapathysubramanian

Science reproducibility is a cornerstone feature in scientific workflows. In most cases, this has been implemented as a way to exactly reproduce the computational steps taken to reach the final results. While these steps are often…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-21 Karan Vahi , Mats Rynge , George Papadimitriou , Duncan A. Brown , Rajiv Mayani , Rafael Ferreira da Silva , Ewa Deelman , Anirban Mandal , Eric Lyons , Michael Zink

Recent developments in the commercial open source community have catalysed the use of Linux containers for scalable deployment of web-based applications to the cloud. Scientific software can be containerized with dependencies, configuration…

Software Engineering · Computer Science 2015-09-30 Robert Nagler , David Bruhwiler , Paul Moeller , Stephen Webb

The transformations, analyses and interpretations of data in scientific workflows are vital for the repeatability and reliability of scientific workflows. This provenance of scientific workflows has been effectively carried out in Grid…

Databases · Computer Science 2016-11-18 Khawar Hasham , Kamran Munir , Jetendr Shamdasani , Richard McClatchey

To reproduce eScience, several challenges need to be solved: scientific workflows need to be automated; the involved software versions need to be provided in an unambiguous way; input data needs to be easily accessible; High-Performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-30 Kessy Abarenkov , Anne Fouilloux , Helmut Neukirchen , Abdulrahman Azab

Reproducibility of computational studies is a hallmark of scientific methodology. It enables researchers to build with confidence on the methods and findings of others, reuse and extend computational pipelines, and thereby drive scientific…

Cloud-native is an approach to building and running scalable applications in modern cloud infrastructures, with the Kubernetes container orchestration platform being often considered as a fundamental cloud-native building block. In this…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-29 Michal Orzechowski , Bartosz Balis , Krzysztof Janecki

The reproducibility of software environments is a critical concern in modern software engineering, with ramifications ranging from the effectiveness of collaboration workflows to software supply chain security and scientific…

Software Engineering · Computer Science 2026-01-21 Julien Malka , Stefano Zacchiroli , Théo Zimmermann

Public cloud computing environments, such as Amazon AWS, Microsoft Azure, and the Google Cloud Platform, have achieved remarkable improvements in computational performance in recent years, and are also expected to be able to perform…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-17 Masahito Ohue , Kento Aoyama , Yutaka Akiyama

In Wolke et al. [1] we compare the efficiency of different resource allocation strategies experimentally. We focused on dynamic environments where virtual machines need to be allocated and deallocated to servers over time. In this companion…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-02 Andreas Wolke , Martin Bichler , Fernando Chirigati , Victoria Steeves
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