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Due to the intensive cost of labor and expertise in annotating 3D medical images at a voxel level, most benchmark datasets are equipped with the annotations of only one type of organs and/or tumors, resulting in the so-called partially…

Computer Vision and Pattern Recognition · Computer Science 2020-11-23 Jianpeng Zhang , Yutong Xie , Yong Xia , Chunhua Shen

Multi-organ segmentation in abdominal Computed Tomography (CT) images is of great importance for diagnosis of abdominal lesions and subsequent treatment planning. Though deep learning based methods have attained high performance, they rely…

Computer Vision and Pattern Recognition · Computer Science 2023-09-19 Meng Han , Xiangde Luo , Wenjun Liao , Shichuan Zhang , Shaoting Zhang , Guotai Wang

Graph neural networks (GNNs) have been widely investigated in the field of semi-supervised graph machine learning. Most methods fail to exploit adequate graph information when labeled data is limited, leading to the problem of…

Machine Learning · Computer Science 2023-03-15 Linxuan Song , Wenxuan Tu , Sihang Zhou , Xinwang Liu , En Zhu

Replacing non-polynomial functions (e.g., non-linear activation functions such as ReLU) in a neural network with their polynomial approximations is a standard practice in privacy-preserving machine learning. The resulting neural network,…

Machine Learning · Computer Science 2024-06-10 Chi Zhang , Jingjing Fan , Man Ho Au , Siu Ming Yiu

Organ at risk (OAR) segmentation is a crucial step for treatment planning and outcome determination in radiotherapy treatments of cancer patients. Several deep learning based segmentation algorithms have been developed in recent years,…

Image and Video Processing · Electrical Eng. & Systems 2022-02-07 Ilkin Isler , Curtis Lisle , Justin Rineer , Patrick Kelly , Damla Turgut , Jacob Ricci , Ulas Bagci

Purpose: Segmentation of organs-at-risk (OARs) is a bottleneck in current radiation oncology pipelines and is often time consuming and labor intensive. In this paper, we propose an atlas-based semi-supervised registration algorithm to…

Computer Vision and Pattern Recognition · Computer Science 2019-11-26 Charles Huang , Masoud Badiei , Hyunseok Seo , Ming Ma , Xiaokun Liang , Dante Capaldi , Michael Gensheimer , Lei Xing

Medical image benchmarks for the segmentation of organs and tumors suffer from the partially labeling issue due to its intensive cost of labor and expertise. Current mainstream approaches follow the practice of one network solving one task.…

Computer Vision and Pattern Recognition · Computer Science 2022-11-15 Yutong Xie , Jianpeng Zhang , Yong Xia , Chunhua Shen

Organs-at-risk (OAR) delineation in computed tomography (CT) is an important step in Radiation Therapy (RT) planning. Recently, deep learning based methods for OAR delineation have been proposed and applied in clinical practice for separate…

Image and Video Processing · Electrical Eng. & Systems 2020-01-14 Shanlin Sun , Yang Liu , Narisu Bai , Hao Tang , Xuming Chen , Qian Huang , Yong Liu , Xiaohui Xie

Recent advances in 3D fully convolutional networks (FCN) have made it feasible to produce dense voxel-wise predictions of volumetric images. In this work, we show that a multi-class 3D FCN trained on manually labeled CT scans of several…

Computer Vision and Pattern Recognition · Computer Science 2018-04-13 Holger R. Roth , Hirohisa Oda , Xiangrong Zhou , Natsuki Shimizu , Ying Yang , Yuichiro Hayashi , Masahiro Oda , Michitaka Fujiwara , Kazunari Misawa , Kensaku Mori

The accurate identification of brain tumors from magnetic resonance imaging (MRI) is essential for timely diagnosis and effective therapeutic intervention. While deep convolutional neural networks (CNNs), particularly those pre-trained on…

Computer Vision and Pattern Recognition · Computer Science 2026-03-02 Helia Abedini , Saba Rahimi , Reza Vaziri

Medical image segmentation can provide detailed information for clinical analysis which can be useful for scenarios where the detailed location of a finding is important. Knowing the location of disease can play a vital role in treatment…

Image and Video Processing · Electrical Eng. & Systems 2021-11-23 Abhishek Srivastava , Sukalpa Chanda , Debesh Jha , Michael A. Riegler , Pål Halvorsen , Dag Johansen , Umapada Pal

Reviewing radiology reports in emergency departments is an essential but laborious task. Timely follow-up of patients with abnormal cases in their radiology reports may dramatically affect the patient's outcome, especially if they have been…

Computation and Language · Computer Science 2018-12-06 Hamed Hassanzadeh , Mahnoosh Kholghi , Anthony Nguyen , Kevin Chu

Shape information is a strong and valuable prior in segmenting organs in medical images. However, most current deep learning based segmentation algorithms have not taken shape information into consideration, which can lead to bias towards…

Computer Vision and Pattern Recognition · Computer Science 2022-07-07 Yuan Yao , Fengze Liu , Zongwei Zhou , Yan Wang , Wei Shen , Alan Yuille , Yongyi Lu

Gastric cancer is the second leading cause of cancer-related deaths worldwide, and the major hurdle in biomedical image analysis is the determination of the cancer extent. This assignment has high clinical relevance and would generally…

Computer Vision and Pattern Recognition · Computer Science 2017-12-21 Yang Nan , Gianmarc Coppola , Qiaokang Liang , Kunglin Zou , Wei Sun , Dan Zhang , Yaonan Wang , Guanzhen Yu

Machine learning models for radiology benefit from large-scale data sets with high quality labels for abnormalities. We curated and analyzed a chest computed tomography (CT) data set of 36,316 volumes from 19,993 unique patients. This is…

Image and Video Processing · Electrical Eng. & Systems 2020-10-14 Rachel Lea Draelos , David Dov , Maciej A. Mazurowski , Joseph Y. Lo , Ricardo Henao , Geoffrey D. Rubin , Lawrence Carin

Even though convolutional neural networks (CNNs) are driving progress in medical image segmentation, standard models still have some drawbacks. First, the use of multi-scale approaches, i.e., encoder-decoder architectures, leads to a…

Computer Vision and Pattern Recognition · Computer Science 2020-02-18 Ashish Sinha , Jose Dolz

Machine learning, particularly convolutional neural networks (CNNs), has shown promise in medical image analysis, especially for thoracic disease detection using chest X-ray images. In this study, we evaluate various CNN architectures,…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Tejas Mirthipati

Deep learning models have demonstrated remarkable success in multi-organ segmentation but typically require large-scale datasets with all organs of interest annotated. However, medical image datasets are often low in sample size and only…

Computer Vision and Pattern Recognition · Computer Science 2023-11-03 Han Liu , Zhoubing Xu , Riqiang Gao , Hao Li , Jianing Wang , Guillaume Chabin , Ipek Oguz , Sasa Grbic

This paper proposes a preference neural network (PNN) to address the problem of indifference preferences orders with new activation function. PNN also solves the Multi-label ranking problem, where labels may have indifference preference…

Machine Learning · Computer Science 2023-09-29 Ayman Elgharabawy , Mukesh Prasad , Chin-Teng Lin

An abdominal ultrasound examination, which is the most common ultrasound examination, requires substantial manual efforts to acquire standard abdominal organ views, annotate the views in texts, and record clinically relevant organ…

Computer Vision and Pattern Recognition · Computer Science 2018-06-06 Zhoubing Xu , Yuankai Huo , JinHyeong Park , Bennett Landman , Andy Milkowski , Sasa Grbic , Shaohua Zhou
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