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We consider a linear symmetric and elliptic PDE and a linear goal functional. We design and analyze a goal-oriented adaptive finite element method, which steers the adaptive mesh-refinement as well as the approximate solution of the arising…

Numerical Analysis · Mathematics 2024-01-12 Roland Becker , Gregor Gantner , Michael Innerberger , Dirk Praetorius

A simple MATLAB implementation of hierarchical shape functions on 2D rectangles is explained and available for download. Global shape functions are ordered for a given polynomial degree according to the indices of the nodes, edges, or…

Mathematical Software · Computer Science 2022-05-17 Alexej Moskovka , Jan Valdman

Rahman and Valdman (2013) introduced a vectorized way to assemble finite element stiffness and mass matrices in MATLAB. Local element matrices are computed all at once by array operations and stored in multi-dimentional arrays (matrices).…

Numerical Analysis · Mathematics 2020-01-13 Leszek Marcinkowski , Jan Valdman

The Maxwell-Bloch equations are a valuable tool to model light-matter interaction, where the application examples range from the description of pulse propagation in two-level media to the elaborate simulation of optoelectronic devices, such…

Quantum Physics · Physics 2021-07-27 Michael Riesch , Christian Jirauschek

Manapy is a parallel, unstructured, finite-volume based solver for the solution of partial differential equations (PDE). The framework is written using Python, it is object-oriented, and is organized in such a way that it is easy to…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-12-10 Imad Kissami , Ahmed Ratnani

Braidlab is a Matlab package for analyzing data using braids. It was designed to be fast, so it can be used on relatively large problems. It uses the object-oriented features of Matlab to provide a class for braids on punctured disks and a…

Geometric Topology · Mathematics 2019-11-18 Jean-Luc Thiffeault , Marko Budisic

In this work we propose a hybrid solver to solve partial differential equation (PDE)s in the latent space. The solver uses an iterative inferencing strategy combined with solution initialization to improve generalization of PDE solutions.…

Machine Learning · Computer Science 2021-04-07 Rishikesh Ranade , Chris Hill , Haiyang He , Amir Maleki , Jay Pathak

MFEM is an open-source, lightweight, flexible and scalable C++ library for modular finite element methods that features arbitrary high-order finite element meshes and spaces, support for a wide variety of discretization approaches and…

Partial differential equations (PDEs) are often computationally challenging to solve, and in many settings many related PDEs must be be solved either at every timestep or for a variety of candidate boundary conditions, parameters, or…

Machine Learning · Computer Science 2022-11-04 Tian Qin , Alex Beatson , Deniz Oktay , Nick McGreivy , Ryan P. Adams

We present mechanoChemML, a machine learning software library for computational materials physics. mechanoChemML is designed to function as an interface between platforms that are widely used for machine learning on one hand, and others for…

Computational Engineering, Finance, and Science · Computer Science 2022-05-03 X. Zhang , G. H. Teichert , Z. Wang , M. Duschenes , S. Srivastava , E. Livingston , J. Holber , M. Faghih Shojaei , A. Sundararajan , K. Garikipati

The multiscale complexity of modern problems in computational science and engineering can prohibit the use of traditional numerical methods in multi-dimensional simulations. Therefore, novel algorithms are required in these situations to…

Numerical Analysis · Mathematics 2021-06-15 Cale Harnish , Luke Dalessandro , Karel Matous , Daniel Livescu

In this work, we develop an adaptive, multivariate partitioning algorithm for solving mixed-integer nonlinear programs (MINLP) with multi-linear terms to global optimality. This iterative algorithm primarily exploits the advantages of…

Optimization and Control · Mathematics 2019-02-05 Harsha Nagarajan , Mowen Lu , Site Wang , Russell Bent , Kaarthik Sundar

This work is a user guide to the FEMPAR scientific software library. FEMPAR is an open-source object-oriented framework for the simulation of partial differential equations (PDEs) using finite element methods on distributed-memory…

Mathematical Software · Computer Science 2019-11-26 Santiago Badia , Alberto F. Martín

pdepath 2.0 is an upgrade of the continuation/bifurcation package pde2path for elliptic systems of PDEs over bounded 2D domains, based on the Matlab pdetoolbox. The new features include a more efficient use of FEM, easier switching between…

Analysis of PDEs · Mathematics 2014-09-11 Tomas Dohnal , Jens D. M. Rademacher , Hannes Uecker , Daniel Wetzel

This paper accompanies first release of libmpdata++, a C++ library implementing the Multidimensional Positive-Definite Advection Transport Algorithm (MPDATA). The library offers basic numerical solvers for systems of generalised transport…

Modeling of physical systems includes extensive use of software packages that implement the accurate finite element method for solving differential equations considered along with the appropriate initial and boundary conditions. When the…

Computational Engineering, Finance, and Science · Computer Science 2018-03-20 O. Kononenko , I. Kononenko

In this paper we make a study of a partial integral differential equation with $p$-Laplacian using a mixed finite element method. Two stable and convergent fixed point schemes are proposed to solve the nonlinear algebraic system. Using the…

Numerical Analysis · Mathematics 2022-03-22 Rui M. P. Almeida , José C. M. Duque , Belchior C. X. Mário

The Active Matter Evaluation Package (AMEP) is a Python library for analyzing simulation data of particle-based and continuum simulations. It provides a powerful and simple interface for handling large data sets and for calculating and…

We summarise three applications of the obstacle problem to membrane contact, elastoplastic torsion and cavitation modelling, and show how the resulting models can be solved using mixed finite elements. It is challenging to construct fixed…

Numerical Analysis · Mathematics 2026-01-28 Tom Gustafsson

We present the Matlab toolbox MacaulayLab, which implements numerical linear algebra algorithms for solving multivariate polynomial systems and rectangular multiparameter eigenvalue problems. Its structure and functionality are the result…

Mathematical Software · Computer Science 2026-05-21 Christof Vermeersch , Bart De Moor