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Related papers: GraSPy: Graph Statistics in Python

200 papers

In this work, we present scikit-fingerprints, a Python package for computation of molecular fingerprints for applications in chemoinformatics. Our library offers an industry-standard scikit-learn interface, allowing intuitive usage and easy…

Software Engineering · Computer Science 2025-08-12 Jakub Adamczyk , Piotr Ludynia

Graph machine learning (GML) is effective in many business applications. However, making GML easy to use and applicable to industry applications with massive datasets remain challenging. We developed GraphStorm, which provides an end-to-end…

The study of complex many-body systems via analysis of the trajectories of the units that dynamically move and interact within them is a non-trivial task. The workflow for extracting meaningful information from the raw trajectory data is…

Materials Science · Physics 2025-10-31 Simone Martino , Matteo Becchi , Andrew Tarzia , Daniele Rapetti , Giovanni M. Pavan

E-graphs have emerged as a versatile data structure with applications in synthesis, optimization, and verification through techniques such as equality saturation. This paper introduces Python bindings for the experimental egglog library…

Programming Languages · Computer Science 2024-04-08 Saul Shanabrook

NEMESISPY is a Python package developed to perform parametric atmospheric modelling and radiative transfer calculation for the retrievals of exoplanetary spectra. It is a recent development of the well-established Fortran NEMESIS library…

Earth and Planetary Astrophysics · Physics 2024-07-10 Jingxuan Yang , Juan Alday , Patrick Irwin

This tutorial review provides a guiding reference to researchers who want to have an overview of the large body of literature about graph spanners. It reviews the current literature covering various research streams about graph spanners,…

A recently introduced text classifier, called SS3, has obtained state-of-the-art performance on the CLEF's eRisk tasks. SS3 was created to deal with risk detection over text streams and, therefore, not only supports incremental training and…

Machine Learning · Computer Science 2020-07-21 Sergio G. Burdisso , Marcelo Errecalde , Manuel Montes-y-Gómez

ruptures is a Python library for offline change point detection. This package provides methods for the analysis and segmentation of non-stationary signals. Implemented algorithms include exact and approximate detection for various…

Computation · Statistics 2018-01-04 Charles Truong , Laurent Oudre , Nicolas Vayatis

We present an open-source Python library for building and using datasets where inputs are clusters of textual data, and outputs are sequences of real values representing one or more time series signals. The news-signals library supports…

Computation and Language · Computer Science 2023-12-19 Chris Hokamp , Demian Gholipour Ghalandari , Parsa Ghaffari

This paper introduces PyGAD, an open-source easy-to-use Python library for building the genetic algorithm. PyGAD supports a wide range of parameters to give the user control over everything in its life cycle. This includes, but is not…

Neural and Evolutionary Computing · Computer Science 2021-06-14 Ahmed Fawzy Gad

We present srlearn, a Python library for boosted statistical relational models. We adapt the scikit-learn interface to this setting and provide examples for how this can be used to express learning and inference problems.

Machine Learning · Computer Science 2019-12-19 Alexander L. Hayes

Graph signal processing (GSP) is a key tool for satisfying the growing demand for information processing over networks. However, the success of GSP in downstream learning and inference tasks is heavily dependent on the prior identification…

Signal Processing · Electrical Eng. & Systems 2021-03-29 Seyed Saman Saboksayr , Gonzalo Mateos , Mujdat Cetin

Privacy policy documents are often lengthy, complex, and difficult for non-expert users to interpret, leading to a lack of transparency regarding the collection, processing, and sharing of personal data. As concerns over online privacy…

Cryptography and Security · Computer Science 2025-07-08 Vijayalakshmi Ramasamy , Seth Barrett , Gokila Dorai , Jessica Zumbach

Exploratory visual data analysis tools empower data analysts to efficiently and intuitively explore data insights throughout the entire analysis cycle. However, the gap between common programmatic analysis (e.g., within computational…

Human-Computer Interaction · Computer Science 2025-01-08 Yue Yu , Leixian Shen , Fei Long , Huamin Qu , Hao Chen

This paper examines software vulnerabilities in common Python packages used particularly for web development. The empirical dataset is based on the PyPI package repository and the so-called Safety DB used to track vulnerabilities in…

Software Engineering · Computer Science 2019-03-12 Jukka Ruohonen

This paper presents the HiPart package, an open-source native python library that provides efficient and interpret-able implementations of divisive hierarchical clustering algorithms. HiPart supports interactive visualizations for the…

Machine Learning · Statistics 2023-05-02 Panagiotis Anagnostou , Sotiris Tasoulis , Vassilis Plagianakos , Dimitris Tasoulis

The application of graph analytics to various domains has yielded tremendous societal and economical benefits in recent years. However, the increasingly widespread adoption of graph analytics comes with a commensurate increase in the need…

Cryptography and Security · Computer Science 2022-06-07 Yang Li , Michael Purcell , Thierry Rakotoarivelo , David Smith , Thilina Ranbaduge , Kee Siong Ng

The GIPSY system provides a framework for a distributed multi-tier demand-driven evaluation of heterogeneous programs, in which certain tiers can generate demands, while others can respond to demands to work on them. They are connected…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-12-03 Sleiman Rabah , Serguei A. Mokhov , Joey Paquet

Production software oftentimes suffers from the issue of performance inefficiencies caused by inappropriate use of data structures, programming abstractions, and conservative compiler optimizations. It is desirable to avoid unnecessary…

Machine Learning · Computer Science 2020-11-20 Yixin Guo , Pengcheng Li , Yingwei Luo , Xiaolin Wang , Zhenlin Wang

From social to biological systems, many real-world systems are characterized by higher-order, non-dyadic interactions. Such systems are conveniently described by hypergraphs, where hyperedges encode interactions among an arbitrary number of…