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Drug-target interaction (DTI) prediction plays a crucial role in drug discovery, and deep learning approaches have achieved state-of-the-art performance in this field. We introduce an ensemble of deep learning models (EnsembleDLM) for DTI…

Biomolecules · Quantitative Biology 2022-01-19 Po-Yu Kao , Shu-Min Kao , Nan-Lan Huang , Yen-Chu Lin

The utility of Twitter data as a medium to support population-level mental health monitoring is not well understood. In an effort to better understand the predictive power of supervised machine learning classifiers and the influence of…

Information Retrieval · Computer Science 2017-01-31 Danielle Mowery , Craig Bryan , Mike Conway

Twitter is currently a popular online social media platform which allows users to share their user-generated content. This publicly-generated user data is also crucial to healthcare technologies because the discovered patterns would hugely…

Machine Learning · Computer Science 2021-05-25 Hamad Zogan , Imran Razzak , Shoaib Jameel , Guandong Xu

Clinical texts, represented in electronic medical records (EMRs), contain rich medical information and are essential for disease prediction, personalised information recommendation, clinical decision support, and medication pattern mining…

Computation and Language · Computer Science 2023-10-10 Hangyu Tu , Lifeng Han , Goran Nenadic

Named Entity Recognition (NER) is an important subtask of information extraction that seeks to locate and recognise named entities. Despite recent achievements, we still face limitations with correctly detecting and classifying entities,…

Information Retrieval · Computer Science 2017-10-31 Diego Esteves , Rafael Peres , Jens Lehmann , Giulio Napolitano

Since the uptake of social media, researchers have mined online discussions to track the outbreak and evolution of specific diseases or chronic conditions such as influenza or depression. To broaden the set of diseases under study, we…

Computers and Society · Computer Science 2021-03-02 Sanja Scepanovic , Luca Maria Aiello , Ke Zhou , Sagar Joglekar , Daniele Quercia

Purpose: Our study explored the use of artificial intelligence (AI) to diagnose autism spectrum disorder (ASD). It focused on machine learning (ML) and deep learning (DL) to detect ASD from text inputs on social media, addressing challenges…

Text classification is a popular topic of natural language processing, which has currently attracted numerous research efforts worldwide. The significant increase of data in social media requires the vast attention of researchers to analyze…

Computation and Language · Computer Science 2020-09-30 Huy Duc Huynh , Hang Thi-Thuy Do , Kiet Van Nguyen , Ngan Luu-Thuy Nguyen

In recent work, we identified and studied a small cohort of Twitter users whose pregnancies with birth defect outcomes could be observed via their publicly available tweets. Exploiting social media's large-scale potential to complement the…

Computation and Language · Computer Science 2019-10-03 Ari Z. Klein , Abeed Sarker , Davy Weissenbacher , Graciela Gonzalez-Hernandez

This study presents an ensemble approach that addresses the challenges of identification and analysis of research articles in rapidly evolving fields, using the field of Artificial Intelligence (AI) as a case study. Our approach included…

Digital Libraries · Computer Science 2023-11-20 Lie Tang , Xianke Zhou , Min Lu

An important part of the information gathering and data analysis is to find out what people think about, either a product or an entity. Twitter is an opinion rich social networking site. The posts or tweets from this data can be used for…

Information Retrieval · Computer Science 2024-09-05 Dwarampudi Mahidhar Reddy , N V Subba Reddy , N V Subba Reddy

In this paper, we present our approach to extracting structured information from unstructured Electronic Health Records (EHR) [2] which can be used to, for example, study adverse drug reactions in patients due to chemicals in their…

Computation and Language · Computer Science 2020-01-30 Amogh Kamat Tarcar , Aashis Tiwari , Vineet Naique Dhaimodker , Penjo Rebelo , Rahul Desai , Dattaraj Rao

Entity recognition is a critical first step to a number of clinical NLP applications, such as entity linking and relation extraction. We present the first attempt to apply state-of-the-art entity recognition approaches on a newly released…

Computation and Language · Computer Science 2019-10-04 Kathleen C. Fraser , Isar Nejadgholi , Berry De Bruijn , Muqun Li , Astha LaPlante , Khaldoun Zine El Abidine

In November 27, 2018, Amazon Web Services (AWS) released Amazon Comprehend Medical (ACM), a deep learning based system that automatically extracts clinical concepts (which include anatomy, medical conditions, protected health information…

Computation and Language · Computer Science 2020-02-04 Benedict Guzman , MS , Isabel Metzger , MS , Yindalon Aphinyanaphongs , M. D. , Ph. D. , Himanshu Grover , Ph. D

Social media has recently emerged as a premier method to disseminate information online. Through these online networks, tens of millions of individuals communicate their thoughts, personal experiences, and social ideals. We therefore…

Social and Information Networks · Computer Science 2016-07-26 Moin Nadeem

Social media texts are significant information sources for several application areas including trend analysis, event monitoring, and opinion mining. Unfortunately, existing solutions for tasks such as named entity recognition that perform…

Computation and Language · Computer Science 2014-11-03 Dilek Küçük , Ralf Steinberger

Cluster analysis is a field of data analysis that extracts underlying patterns in data. One application of cluster analysis is in text-mining, the analysis of large collections of text to find similarities between documents. We used a…

Machine Learning · Statistics 2014-08-26 Daniel Godfrey , Caley Johns , Carl Meyer , Shaina Race , Carol Sadek

Taking medicines is a fundamental aspect to cure illnesses. However, studies have shown that it can be hard for patients to remember the correct posology. More aggravating, a wrong dosage generally causes the disease to worsen. Although,…

Computer Vision and Pattern Recognition · Computer Science 2022-03-29 Danilo Avola , Luigi Cinque , Alessio Fagioli , Gian Luca Foresti , Marco Raoul Marini , Alessio Mecca , Daniele Pannone

Social media has grown to be a crucial information source for pharmacovigilance studies where an increasing number of people post adverse reactions to medical drugs that are previously unreported. Aiming to effectively monitor various…

Machine Learning · Computer Science 2018-02-19 Shaika Chowdhury , Chenwei Zhang , Philip S. Yu

Applying natural language processing for mining and intelligent information access to tweets (a form of microblog) is a challenging, emerging research area. Unlike carefully authored news text and other longer content, tweets pose a number…

Computation and Language · Computer Science 2014-11-26 Leon Derczynski , Diana Maynard , Giuseppe Rizzo , Marieke van Erp , Genevieve Gorrell , Raphaël Troncy , Johann Petrak , Kalina Bontcheva