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Segmenting anatomical structures in medical images has been successfully addressed with deep learning methods for a range of applications. However, this success is heavily dependent on the quality of the image that is being segmented. A…

Image and Video Processing · Electrical Eng. & Systems 2020-07-06 Ilkay Oksuz , James R. Clough , Bram Ruijsink , Esther Puyol Anton , Aurelien Bustin , Gastao Cruz , Claudia Prieto , Andrew P. King , Julia A. Schnabel

Cardiovascular magnetic resonance (CMR) imaging is the gold standard for diagnosing several heart diseases due to its non-invasive nature and proper contrast. MR imaging is time-consuming because of signal acquisition and image formation…

Image and Video Processing · Electrical Eng. & Systems 2025-04-29 Kian Anvari Hamedani , Narges Razizadeh , Shahabedin Nabavi , Mohsen Ebrahimi Moghaddam

We propose a new variational model for joint image reconstruction and motion estimation in spatiotemporal imaging, which is investigated along a general framework that we present with shape theory. This model consists of two components, one…

Numerical Analysis · Mathematics 2019-11-06 Chong Chen , Barbara Gris , Ozan Öktem

Magnetic Resonance Imaging (MRI) is a widely used medical imaging modality boasting great soft tissue contrast without ionizing radiation, but unfortunately suffers from long acquisition times. Long scan times can lead to motion artifacts,…

Signal Processing · Electrical Eng. & Systems 2022-07-05 Brett Levac , Sidharth Kumar , Sofia Kardonik , Jonathan I. Tamir

Motion remains a major challenge in magnetic resonance (MR) imaging, particularly in free-breathing cardiac MR imaging, where data are acquired over multiple heartbeats at varying respiratory phases. We adopt a model-based approach for…

Image and Video Processing · Electrical Eng. & Systems 2025-01-29 Kwang Eun Jang , Mario O. Malavé , Dwight G. Nishimura

Myocardial motion and deformation are rich descriptors that characterize cardiac function. Image registration, as the most commonly used technique for myocardial motion tracking, is an ill-posed inverse problem which often requires prior…

Image and Video Processing · Electrical Eng. & Systems 2022-06-09 Chen Qin , Shuo Wang , Chen Chen , Wenjia Bai , Daniel Rueckert

Cardiac motion estimation is an important diagnostic tool to detect heart diseases and it has been explored with modalities such as MRI and conventional ultrasound (US) sequences. US cardiac motion estimation still presents challenges…

Computer Vision and Pattern Recognition · Computer Science 2017-04-26 Angelica I. Aviles , Thomas Widlak , Alicia Casals , Maartje M. Nillesen , Habib Ammari

Cardiac cine magnetic resonance imaging (MRI) is one of the important means to assess cardiac functions and vascular abnormalities. Mitigating artifacts arising during image reconstruction and accelerating cardiac cine MRI acquisition to…

Image and Video Processing · Electrical Eng. & Systems 2024-07-03 Xiaoxiang Han , Yang Chen , Qiaohong Liu , Yiman Liu , Keyan Chen , Yuanjie Lin , Weikun Zhang

Purpose: To enable rigid-body motion tolerant parallel volumetric magnetic resonance imaging by retrospective head motion correction on a variety of spatio-temporal scales and imaging sequences. Theory and methods: Tolerance against…

Myocardial T1 mapping is a cardiac MRI technique, used to assess myocardial fibrosis. In this technique, a series of T1-weighted MRI images are acquired with different saturation or inversion times. These images are fitted to the T1 model…

Image and Video Processing · Electrical Eng. & Systems 2021-09-22 Dar Arava , Mohammad Masarwy , Samah Khawaled , Moti Freiman

Numerous applications in signal processing have benefited from the theory of compressed sensing which shows that it is possible to reconstruct signals sampled below the Nyquist rate when certain conditions are satisfied. One of these…

Multimedia · Computer Science 2012-03-27 Cagdas Bilen , Yao Wang , Ivan Selesnick

A joint image reconstruction and segmentation approach based on disentangled representation learning was trained to enable cardiac cine MR imaging in real-time and under free-breathing. An exploratory feasibility study tested the proposed…

Motion artifacts are a pervasive problem in MRI, leading to misdiagnosis or mischaracterization in population-level imaging studies. Current retrospective rigid intra-slice motion correction techniques jointly optimize estimates of the…

Image and Video Processing · Electrical Eng. & Systems 2023-11-17 Nalini M. Singh , Neel Dey , Malte Hoffmann , Bruce Fischl , Elfar Adalsteinsson , Robert Frost , Adrian V. Dalca , Polina Golland

Motion correction is an essential preprocessing step in functional Magnetic Resonance Imaging (fMRI) of the fetal brain with the aim to remove artifacts caused by fetal movement and maternal breathing and consequently to suppress erroneous…

In recent years, machine learning (ML) based reconstruction has been widely investigated and employed in cardiac magnetic resonance (CMR) imaging. ML-based reconstructions can deliver clinically acceptable image quality under substantially…

Image and Video Processing · Electrical Eng. & Systems 2024-11-18 Chi Zhang , Michael Loecher , Cagan Alkan , Mahmut Yurt , Shreyas S. Vasanawala , Daniel B. Ennis

Magnetic resonance imaging (MRI) is highly susceptible to patient motion due to its relatively long acquisition times and the fact that data are acquired sequentially in k-space. Even small patient movements introduce phase inconsistencies…

Computer Vision and Pattern Recognition · Computer Science 2026-05-22 Antonio Ortiz-Gonzalez , Erich Kobler , Lukas Schletter , Alexander Effland

Four-dimensional computed tomography (4DCT) is essential for medical imaging applications like radiotherapy, which demand precise respiratory motion representation. Traditional methods for reconstructing 4DCT data suffer from artifacts and…

Medical Physics · Physics 2025-07-21 Antoine De Paepe , Alexandre Bousse , Clémentine Phung-Ngoc , Dimitris Visvikis

The aim of this paper is to establish a nonlinear variational approach to the reconstruction of moving density images from indirect dynamic measurements. Our approach is to model the dynamics as a hyperelastic deformation of an initial…

Numerical Analysis · Mathematics 2015-12-01 Martin Burger , Jan Modersitzki , Sebastian Suhr

In this paper we study the reconstruction of moving object densities from undersampled dynamic X-ray tomography in two dimensions. A particular motivation of this study is to use realistic measurement protocols for practical applications,…

Numerical Analysis · Mathematics 2018-03-28 Martin Burger , Hendrik Dirks , Lena Frerking , Andreas Hauptmann , Tapio Helin , Samuli Siltanen

Motion and deformation analysis of cardiac magnetic resonance (CMR) imaging videos is crucial for assessing myocardial strain of patients with abnormal heart functions. Recent advances in deep learning-based image registration algorithms…

Computer Vision and Pattern Recognition · Computer Science 2024-12-10 Jiarui Xing , Nivetha Jayakumar , Nian Wu , Yu Wang , Frederick H. Epstein , Miaomiao Zhang