Related papers: OpenMX Viewer: A web-based crystalline and molecul…
Drawing and visualisation of molecular structures are some of the most common tasks carried out in structural glycobiology, typically using various software. In this perspective article, we outline developments in the computational tools…
Large sky surveys are providing a huge amount of information for studies of the interstellar medium, the galactic structure or the cosmic web. Setting into a common frame information coming from different wavelengths, over large fields of…
MX is a portable beamline control system that has been described at previous NOBUGS meetings. This talk will briefly review MX and then discuss important changes and improvements made since the last meeting in 2000. For materials science,…
Visualizing and navigating through large astronomy images from a remote location with current astronomy display tools can be a frustrating experience in terms of speed and ergonomics, especially on mobile devices. In this paper, we present…
ORBKIT is a toolbox for post-processing electronic structure calculations based on a highly modular and portable Python architecture. The program allows computing a multitude of electronic properties of molecular systems on arbitrary…
We present a generalized framework for cellular/lattice based visualizations in two dimensions based on state of the art computing abstractions. Our implementation takes the form of a library of reusable functions written in C++ which hides…
Magboltz is widely used to compute electron transport properties in gas mixtures for detector applications. Its text-based workflow, however, can be a barrier for routine use, especially for users who are not already familiar with the…
HEALPix by G\'orski et. al. (2005) is de-facto standard for Cosmic Microwave Background (CMB) data storage and analysis, and is widely used in current and upcoming CMB experiments. Almost all the datasets in Legacy Archive for Microwave…
The 3D structure of The Milky Way's Central Molecular Zone (CMZ) informs our understanding of star formation cycles, black hole accretion, and the evolution of galactic nuclei. However, a comprehensive 3D model has remained elusive, as no…
We present TopoGaussian, a holistic, particle-based pipeline for inferring the interior structure of an opaque object from easily accessible photos and videos as input. Traditional mesh-based approaches require tedious and error-prone mesh…
We introduce $\texttt{cuSkyrmion}$, a 3-dimensional Skyrme model computation and visualization software, that is written in $\texttt{CUDA C}$ for rapid computation and visualization of especially the arrested Newton flow algorithm. The…
Context. In order to understand the evolution of molecular clouds it is important to identify the departures from self-similarity associated with the scales of self-gravity and the driving of turbulence. Aims. A method is described based on…
Decades of hardware, methodological, and algorithmic development have propelled molecular dynamics (MD) simulations to the forefront of materials-modeling techniques, bridging the gap between electronic-structure theory and continuum…
The Open Knowledgebase of Interatomic Models (OpenKIM) project is a framework intended to facilitate access to standardized implementations of interatomic models for molecular simulations along with computational protocols to evaluate them.…
We present here a browser-based application for visualizing patterns of connectivity in 3D stacked data matrices with large numbers of pairwise relations. Visualizing a connectivity matrix, looking for trends and patterns, and dynamically…
Quantum computing is an emerging field that utilizes the unique principles of quantum mechanics to offer significant advantages in algorithm execution over classical approaches. This potential is particularly promising in the domain of…
Virtual reality is a powerful tool with the ability to immerse a user within a completely external environment. This immersion is particularly useful when visualizing and analyzing interactions between small organic molecules, molecular…
This paper presents lpviz, a browser-based visualization tool for linear programming. lpviz is deeply interactive, offering an intuitive interface where users can directly draw and edit the feasible region and objective vector, without…
Real-time visualization of large-scale volumetric data remains challenging, as direct volume rendering and voxel-based methods suffer from prohibitively high computational cost. We propose Variable Basis Mapping (VBM), a framework that…
The growth of computational astrophysics and complexity of multidimensional datasets evidences the need for new versatile visualization tools for both analysis and presentation of the data. In this work we show how to use the open source…