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Related papers: Publicly Available Clinical BERT Embeddings

200 papers

Recent research has achieved impressive results on understanding and improving source code by building up on machine-learning techniques developed for natural languages. A significant advancement in natural-language understanding has come…

Software Engineering · Computer Science 2020-08-19 Aditya Kanade , Petros Maniatis , Gogul Balakrishnan , Kensen Shi

Knowledge sharing is crucial in healthcare, especially when leveraging data from multiple clinical sites to address data scarcity, reduce costs, and enable timely interventions. Transfer learning can facilitate cross-site knowledge…

Computation and Language · Computer Science 2024-09-24 Yuhe Gao , Runxue Bao , Yuelyu Ji , Yiming Sun , Chenxi Song , Jeffrey P. Ferraro , Ye Ye

This paper presents new state-of-the-art models for three tasks, part-of-speech tagging, syntactic parsing, and semantic parsing, using the cutting-edge contextualized embedding framework known as BERT. For each task, we first replicate and…

Computation and Language · Computer Science 2020-05-26 Han He , Jinho D. Choi

Previous work on document-level NMT usually focuses on limited contexts because of degraded performance on larger contexts. In this paper, we investigate on using large contexts with three main contributions: (1) Different from previous…

Computation and Language · Computer Science 2019-11-11 Liangyou Li , Xin Jiang , Qun Liu

Pre-trained language models such as BERT have been a key ingredient to achieve state-of-the-art results on a variety of tasks in natural language processing and, more recently, also in information retrieval.Recent research even claims that…

Information Retrieval · Computer Science 2022-05-03 Emma J. Gerritse , Faegheh Hasibi , Arjen P. de Vries

Dense vector representations for textual data are crucial in modern NLP. Word embeddings and sentence embeddings estimated from raw texts are key in achieving state-of-the-art results in various tasks requiring semantic understanding.…

Computation and Language · Computer Science 2023-07-06 Sonal Sannigrahi , Josef van Genabith , Cristina Espana-Bonet

Pre-trained contextualized embedding models such as BERT are a standard building block in many natural language processing systems. We demonstrate that the sentence-level representations produced by some off-the-shelf contextualized…

Computation and Language · Computer Science 2022-06-06 Xiliang Zhu , David Rossouw , Shayna Gardiner , Simon Corston-Oliver

This paper investigates the problem of learning cross-lingual representations in a contextual space. We propose Cross-Lingual BERT Transformation (CLBT), a simple and efficient approach to generate cross-lingual contextualized word…

Computation and Language · Computer Science 2019-09-17 Yuxuan Wang , Wanxiang Che , Jiang Guo , Yijia Liu , Ting Liu

Language models are pre-trained using large corpora of generic data like book corpus, common crawl and Wikipedia, which is essential for the model to understand the linguistic characteristics of the language. New studies suggest using…

Computation and Language · Computer Science 2022-09-28 Arnav Ladkat , Aamir Miyajiwala , Samiksha Jagadale , Rekha Kulkarni , Raviraj Joshi

Clinical notes contain an extensive record of a patient's health status, such as smoking status or the presence of heart conditions. However, this detail is not replicated within the structured data of electronic health systems.…

Computation and Language · Computer Science 2020-09-18 Andriy Mulyar , Elliot Schumacher , Masoud Rouhizadeh , Mark Dredze

Automatic readability assessment (ARA) is the task of evaluating the level of ease or difficulty of text documents for a target audience. For researchers, one of the many open problems in the field is to make such models trained for the…

Computation and Language · Computer Science 2021-08-02 Joseph Marvin Imperial

Recently, multilingual BERT works remarkably well on cross-lingual transfer tasks, superior to static non-contextualized word embeddings. In this work, we provide an in-depth experimental study to supplement the existing literature of…

Computation and Language · Computer Science 2020-04-21 Chi-Liang Liu , Tsung-Yuan Hsu , Yung-Sung Chuang , Hung-Yi Lee

We study clinical Named Entity Recognition (NER) on the CADEC corpus and compare three families of approaches: (i) BERT-style encoders (BERT Base, BioClinicalBERT, RoBERTa-large), (ii) GPT-4o used with few-shot in-context learning (ICL)…

Computation and Language · Computer Science 2025-10-28 Andrei Baroian

Contextualized representation models such as ELMo (Peters et al., 2018a) and BERT (Devlin et al., 2018) have recently achieved state-of-the-art results on a diverse array of downstream NLP tasks. Building on recent token-level probing work,…

Natural language processing (NLP) is becoming an important means for automatic recognition of human traits and states, such as intoxication, presence of psychiatric disorders, presence of airway disorders and states of stress. Such…

Computation and Language · Computer Science 2021-06-03 Joppe Wouts , Janna de Boer , Alban Voppel , Sanne Brederoo , Sander van Splunter , Iris Sommer

Deep Contextual Language Models (LMs) like ELMO, BERT, and their successors dominate the landscape of Natural Language Processing due to their ability to scale across multiple tasks rapidly by pre-training a single model, followed by…

Computation and Language · Computer Science 2021-12-21 Shaily Bhatt , Poonam Goyal , Sandipan Dandapat , Monojit Choudhury , Sunayana Sitaram

Training deep learning models with limited labelled data is an attractive scenario for many NLP tasks, including document classification. While with the recent emergence of BERT, deep learning language models can achieve reasonably good…

Computation and Language · Computer Science 2021-06-15 Jinghui Lu , Maeve Henchion , Ivan Bacher , Brian Mac Namee

The exponential increase in scientific literature and online information necessitates efficient methods for extracting knowledge from textual data. Natural language processing (NLP) plays a crucial role in addressing this challenge,…

Computation and Language · Computer Science 2025-10-22 Zhyar Rzgar K. Rostam , Gábor Kertész

Contextual word embeddings obtained from pre-trained language model (PLM) have proven effective for various natural language processing tasks at the word level. However, interpreting the hidden aspects within embeddings, such as syntax and…

Computation and Language · Computer Science 2023-10-10 Nayoung Choi

ELMo embeddings (Peters et. al, 2018) had a huge impact on the NLP community and may recent publications use these embeddings to boost the performance for downstream NLP tasks. However, integration of ELMo embeddings in existent NLP…

Computation and Language · Computer Science 2019-04-08 Nils Reimers , Iryna Gurevych