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Learning the undirected graph structure of a Markov network from data is a problem that has received a lot of attention during the last few decades. As a result of the general applicability of the model class, a myriad of methods have been…

In this note we explore a fully unsupervised deep-learning framework for simulating non-linear structural equation models from observational training data. The main contribution of this note is an architecture for applying moment-matching…

Machine Learning · Statistics 2020-07-28 Michael Park

Bayesian network structure learning algorithms with limited data are being used in domains such as systems biology and neuroscience to gain insight into the underlying processes that produce observed data. Learning reliable networks from…

Machine Learning · Statistics 2013-07-10 Diane Oyen , Terran Lane

There is enormous interest -- both mathematically and in diverse applications -- in understanding the dynamics of coupled oscillator networks. The real-world motivation of such networks arises from studies of the brain, the heart, ecology,…

Dynamical Systems · Mathematics 2023-08-22 Stephen Coombes , Mustafa Sayli , Rüdiger Thul , Rachel Nicks , Mason A Porter , Yi Ming Lai

Recent advances in learning or identification of nonlinear dynamics focus on learning a suitable model within a pre-specified model class. However, a key difficulty that remains is the choice of the model class from which the dynamics will…

Systems and Control · Electrical Eng. & Systems 2023-09-29 Charis Stamouli , Evangelos Chatzipantazis , George J. Pappas

Observability is a modelling property that describes the possibility of inferring the internal state of a system from observations of its output. A related property, structural identifiability, refers to the theoretical possibility of…

Quantitative Methods · Quantitative Biology 2018-12-12 Alejandro F. Villaverde

Continuous-time dynamics models, such as neural ordinary differential equations, have enabled the modeling of underlying dynamics in time-series data and accurate forecasting. However, parameterization of dynamics using a neural network…

Machine Learning · Computer Science 2022-10-14 Fan Wu , Sanghyun Hong , Donsub Rim , Noseong Park , Kookjin Lee

Demystifying effective connectivity among neuronal populations has become the trend to understand the brain mechanisms of Parkinson's disease, schizophrenia, mild traumatic brain injury, and many other unlisted neurological diseases.…

Quantitative Methods · Quantitative Biology 2019-09-27 Po-Ya Hsu

We study the problem of experiment design to learn causal structures from interventional data. We consider an active learning setting in which the experimenter decides to intervene on one of the variables in the system in each step and uses…

Artificial Intelligence · Computer Science 2020-09-09 Amir Amirinezhad , Saber Salehkaleybar , Matin Hashemi

Bayesian neural networks (BNNs) have recently regained a significant amount of attention in the deep learning community due to the development of scalable approximate Bayesian inference techniques. There are several advantages of using a…

Machine Learning · Statistics 2023-05-02 Aliaksandr Hubin , Geir Storvik

The abundance of data affords researchers to pursue more powerful computational tools to learn the dynamics of complex system, such as neural networks, engineered systems and social networks. Traditional machine learning approaches capture…

Machine Learning · Computer Science 2024-05-16 Yan Shen , Fan Yang , Mingchen Gao , Wen Dong

System identification is of special interest in science and engineering. This article is concerned with a system identification problem arising in stochastic dynamic systems, where the aim is to estimate the parameters of a system along…

Methodology · Statistics 2022-01-27 Christos Merkatas , Simo Särkkä

Traditional statistical approaches primarily aim to model associations between variables, but many scientific and practical questions require causal methods instead. These approaches rely on assumptions about an underlying structure, often…

Methodology · Statistics 2025-11-26 Sjoerd Hermes , Joost van Heerwaarden , Fred van Eeuwijk , Pariya Behrouzi

This chapter explores dynamical structural equation models (DSEMs) and their nonlinear generalizations into sheaves of dynamical systems. It demonstrates these two disciplines on part of the food web in the Bering Sea. The translation from…

Algebraic Topology · Mathematics 2025-11-07 Michael Robinson , Michael L. Szulczewski , James T. Thorson

Markov networks are popular models for discrete multivariate systems where the dependence structure of the variables is specified by an undirected graph. To allow for more expressive dependence structures, several generalizations of Markov…

Methodology · Statistics 2021-03-30 Johan Pensar , Henrik Nyman , Jukka Corander

A Bayesian network is a graphical model that encodes probabilistic relationships among variables of interest. When used in conjunction with statistical techniques, the graphical model has several advantages for data analysis. One, because…

Machine Learning · Computer Science 2022-01-11 David Heckerman

The engineering design process often relies on mathematical modeling that can describe the underlying dynamic behavior. In this work, we present a data-driven methodology for modeling the dynamics of nonlinear systems. To simplify this…

Dynamical Systems · Mathematics 2024-01-05 Pawan Goyal , Peter Benner

The dynamics of systems of interacting agents is determined by the structure of their coupling network. The knowledge of the latter is, therefore, highly desirable, for instance, to develop efficient control schemes, to accurately predict…

Adaptation and Self-Organizing Systems · Physics 2021-10-13 Melvyn Tyloo , Robin Delabays , Philippe Jacquod

We describe a method for utilizing the known structure of input data to make learning more efficient. Our work is in the domain of programming languages, and we use deep neural networks to do program analysis. Computer programs include a…

Neural and Evolutionary Computing · Computer Science 2019-04-01 Zehra Sura , Tong Chen , Hyojin Sung

Methods for learning Bayesian network structure can discover dependency structure between observed variables, and have been shown to be useful in many applications. However, in domains that involve a large number of variables, the space of…

Machine Learning · Computer Science 2012-12-12 Eran Segal , Dana Pe'er , Aviv Regev , Daphne Koller , Nir Friedman
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