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We give a generating function for the number of graphs with given numerical properties and prescribed weighted number of connected components. As an application, we give a generating function for the number of bipartite graphs of given…

Combinatorics · Mathematics 2016-06-28 Joungmin Song

Contour trees have been developed to visualize or encode scalar data in imaging technologies and scientific simulations. Contours are defined on a continuous scalar field. For discrete data, a continuous function is first interpolated,…

Computer Vision and Pattern Recognition · Computer Science 2022-06-27 Yuqing Song

The use of machine learning algorithms in finance, medicine, and criminal justice can deeply impact human lives. As a consequence, research into interpretable machine learning has rapidly grown in an attempt to better control and fix…

Machine Learning · Computer Science 2021-02-02 Thibaut Vidal , Toni Pacheco , Maximilian Schiffer

We study the polyregular string-to-string functions, which are certain functions of polynomial output size that can be described using automata and logic. We describe a system of combinators that generates exactly these functions. Unlike…

Logic in Computer Science · Computer Science 2023-04-27 Mikołaj Bojańczyk

Integrating functions on discrete domains into neural networks is key to developing their capability to reason about discrete objects. But, discrete domains are (1) not naturally amenable to gradient-based optimization, and (2) incompatible…

Machine Learning · Computer Science 2022-11-15 Nikolaos Karalias , Joshua Robinson , Andreas Loukas , Stefanie Jegelka

We give closed form expressions for the numbers of multi-rooted plane trees with specified degrees of root vertices. This results in an infinite number of integer sequences some of which are known to have an alternative interpretation. We…

Combinatorics · Mathematics 2024-02-06 Anwar Al Ghabra , K. Gopala Krishna , Patrick Labelle , Vasilisa Shramchenko

Regression trees have emerged as a preeminent tool for solving real-world regression problems due to their ability to deal with nonlinearities, interaction effects and sharp discontinuities. In this article, we rather study regression trees…

Machine Learning · Statistics 2025-11-14 Nathan Wycoff

We prove that finding a rooted subtree with at least $k$ leaves in a digraph is a fixed parameter tractable problem. A similar result holds for finding rooted spanning trees with many leaves in digraphs from a wide family $\cal L$ that…

Data Structures and Algorithms · Computer Science 2007-05-23 Noga Alon , Fedor Fomin , Gregory Gutin , Michael Krivelevich , Saket Saurabh

We study the topological construction called Mapper in the context of simply connected domains, in particular on images. The Mapper construction can be considered as a generalization for contour, split, and joint trees on simply connected…

Computer Vision and Pattern Recognition · Computer Science 2017-12-11 Alejandro Robles , Mustafa Hajij , Paul Rosen

The kernel method is a potential approach to analyzing structured data such as sequences, trees, and graphs; however, unordered trees have not been investigated extensively. Kimura et al. (2011) proposed a kernel function for unordered…

Data Structures and Algorithms · Computer Science 2012-06-22 Daisuke Kimura , Hisashi Kashima

Taking a Feynman categorical perspective, several key aspects of the geometry of surfaces are deduced from combinatorial constructions with graphs. This provides a direct route from combinatorics of graphs to string topology operations via…

Algebraic Topology · Mathematics 2022-01-26 Clemens Berger , Ralph M. Kaufmann

Text classification is a primary task in natural language processing (NLP). Recently, graph neural networks (GNNs) have developed rapidly and been applied to text classification tasks. As a special kind of graph data, the tree has a simpler…

Computation and Language · Computer Science 2022-08-23 Chong Zhang , He Zhu , Xingyu Peng , Junran Wu , Ke Xu

We present a novel methodology to jointly perform multi-task learning and infer intrinsic relationship among tasks by an interpretable and sparse graph. Unlike existing multi-task learning methodologies, the graph structure is not assumed…

Machine Learning · Computer Science 2020-09-15 Shujian Yu , Francesco Alesiani , Ammar Shaker , Wenzhe Yin

Graphs and hypergraphs are foundational structures in discrete mathematics. They have many practical applications, including the rapidly developing field of bioinformatics, and more generally, biomathematics. They are also a source of…

Combinatorics · Mathematics 2019-01-16 Mark Budden , Josh Hiller , Andrew Penland

We give a simple characterization of the functions that can be computed deterministically by anonymous processes in dynamic networks, depending on the number of leaders in the network. In addition, we provide efficient distributed…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-21 Giuseppe A. Di Luna , Giovanni Viglietta

We look at the internal structure of neural networks which is usually treated as a black box. The easiest and the most comprehensible thing to do is to look at a binary classification and try to understand the approach a neural network…

Machine Learning · Computer Science 2023-01-25 Tushar Pandey

Our understanding of neural computation is founded on the assumption that neurons fire in response to a linear summation of inputs. Yet experiments demonstrate that some neurons are capable of complex functions that require interactions…

Biological Physics · Physics 2026-03-23 Christopher W. Lynn

In the talk at the workshop my aim was to demonstrate the usefulness of graph techniques for tackling problems that have been studied predominantly as problems on the term level: increasing sharing in functional programs, and addressing…

Logic in Computer Science · Computer Science 2019-02-07 Clemens Grabmayer

The design of neural architectures for structured objects is typically guided by experimental insights rather than a formal process. In this work, we appeal to kernels over combinatorial structures, such as sequences and graphs, to derive…

Neural and Evolutionary Computing · Computer Science 2017-10-31 Tao Lei , Wengong Jin , Regina Barzilay , Tommi Jaakkola

Hierarchies feature prominently in anatomical accounts of cortical organisation. An open question is which computational (algorithmic) processes are implemented by these hierarchies. One renowned hypothesis is that cortical hierarchies…

Neurons and Cognition · Quantitative Biology 2017-09-08 Andreea O. Diaconescu , Vladimir Litvak , Christoph Mathys , Lars Kasper , Karl J. Friston , Klaas E. Stephan