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We propose a segmentation framework that uses deep neural networks and introduce two innovations. First, we describe a biophysics-based domain adaptation method. Second, we propose an automatic method to segment white and gray matter, and…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Amir Gholami , Shashank Subramanian , Varun Shenoy , Naveen Himthani , Xiangyu Yue , Sicheng Zhao , Peter Jin , George Biros , Kurt Keutzer

Transfer learning is widely used for training machine learning models. Here, we study the role of transfer learning for training fully convolutional networks (FCNs) for medical image segmentation. Our experiments show that although transfer…

Computer Vision and Pattern Recognition · Computer Science 2022-04-05 Davood Karimi , Simon K. Warfield , Ali Gholipour

Semantic segmentation is a crucial task in medical imaging. Although supervised learning techniques have proven to be effective in performing this task, they heavily depend on large amounts of annotated training data. The recently…

Computer Vision and Pattern Recognition · Computer Science 2024-11-20 Ron Keuth , Lasse Hansen , Maren Balks , Ronja Jäger , Anne-Nele Schröder , Ludger Tüshaus , Mattias Heinrich

High-quality pixel-level annotations of medical images are essential for supervised segmentation tasks, but obtaining such annotations is costly and requires medical expertise. To address this challenge, we propose a novel coarse-to-fine…

Computer Vision and Pattern Recognition · Computer Science 2025-08-06 Anghong Du , Nay Aung , Theodoros N. Arvanitis , Stefan K. Piechnik , Joao A C Lima , Steffen E. Petersen , Le Zhang

Medical image segmentation is a fundamental and critical step in many image-guided clinical approaches. Recent success of deep learning-based segmentation methods usually relies on a large amount of labeled data, which is particularly…

Computer Vision and Pattern Recognition · Computer Science 2023-11-15 Rushi Jiao , Yichi Zhang , Le Ding , Rong Cai , Jicong Zhang

Generalization capabilities of learning-based medical image segmentation across domains are currently limited by the performance degradation caused by the domain shift, particularly for ultrasound (US) imaging. The quality of US images…

Image and Video Processing · Electrical Eng. & Systems 2024-02-07 Yuan Bi , Zhongliang Jiang , Ricarda Clarenbach , Reza Ghotbi , Angelos Karlas , Nassir Navab

We propose a novel deep-learning-based system for vessel segmentation. Existing methods using CNNs have mostly relied on local appearances learned on the regular image grid, without considering the graphical structure of vessel shape. To…

Computer Vision and Pattern Recognition · Computer Science 2021-05-07 Seung Yeon Shin , Soochahn Lee , Il Dong Yun , Kyoung Mu Lee

Brain extraction in magnetic resonance imaging (MRI) data is an important segmentation step in many neuroimaging preprocessing pipelines. Image segmentation is one of the research fields in which deep learning had the biggest impact in…

Image and Video Processing · Electrical Eng. & Systems 2023-08-15 Lukas Fisch , Stefan Zumdick , Carlotta Barkhau , Daniel Emden , Jan Ernsting , Ramona Leenings , Kelvin Sarink , Nils R. Winter , Benjamin Risse , Udo Dannlowski , Tim Hahn

Radiologists use various imaging modalities to aid in different tasks like diagnosis of disease, lesion visualization, surgical planning and prognostic evaluation. Most of these tasks rely on the the accurate delineation of the anatomical…

Image and Video Processing · Electrical Eng. & Systems 2019-08-22 Ronnie Rajan , Rachana Sathish , Debdoot Sheet

Chronic wounds and associated complications present ever growing burdens for clinics and hospitals world wide. Venous, arterial, diabetic, and pressure wounds are becoming increasingly common globally. These conditions can result in highly…

In medical imaging, segmentation models have known a significant improvement in the past decade and are now used daily in clinical practice. However, similar to classification models, segmentation models are affected by adversarial attacks.…

Image and Video Processing · Electrical Eng. & Systems 2023-10-06 Othmane Laousy , Alexandre Araujo , Guillaume Chassagnon , Nikos Paragios , Marie-Pierre Revel , Maria Vakalopoulou

Convolutional Neural Networks (CNNs) have achieved remarkable success across a wide range of machine learning tasks by leveraging hierarchical feature learning through deep architectures. However, the large number of layers and millions of…

Machine Learning · Statistics 2025-11-18 Biyi Fang , Truong Vo , Jean Utke , Diego Klabjan

As one of the fundamental tasks in computer vision, semantic segmentation plays an important role in real world applications. Although numerous deep learning models have made notable progress on several mainstream datasets with the rapid…

Computer Vision and Pattern Recognition · Computer Science 2020-10-06 Bin Zhang , Shengjie Zhao , Rongqing Zhang

We present a deep learning approach to the ISIC 2017 Skin Lesion Classification Challenge using a multi-scale convolutional neural network. Our approach utilizes an Inception-v3 network pre-trained on the ImageNet dataset, which is…

Computer Vision and Pattern Recognition · Computer Science 2017-03-07 Terrance DeVries , Dhanesh Ramachandram

In this work, we introduce Progressive Growing of Patch Size, an automatic curriculum learning approach for 3D medical image segmentation. Our approach progressively increases the patch size during model training, resulting in an improved…

Computer Vision and Pattern Recognition · Computer Science 2025-11-05 Stefan M. Fischer , Johannes Kiechle , Laura Daza , Lina Felsner , Richard Osuala , Daniel M. Lang , Karim Lekadir , Jan C. Peeken , Julia A. Schnabel

In this paper, an automatic algorithm aimed at volumetric segmentation of acute ischemic stroke lesion in non-contrast computed tomography brain 3D images is proposed. Our deep-learning approach is based on the popular 3D U-Net…

Image and Video Processing · Electrical Eng. & Systems 2023-10-31 A. V. Dobshik , S. K. Verbitskiy , I. A. Pestunov , K. M. Sherman , Yu. N. Sinyavskiy , A. A. Tulupov , V. B. Berikov

Wounds, such as foot ulcers, pressure ulcers, leg ulcers, and infected wounds, come up with substantial problems for healthcare professionals. Prompt and accurate segmentation is crucial for effective treatment. However, contemporary…

Image and Video Processing · Electrical Eng. & Systems 2024-08-22 Md. Zihad Bin Jahangir , Sumaiya Akter , MD Abdullah Al Nasim , Kishor Datta Gupta , Roy George

Even though convolutional neural networks can classify objects in images very accurately, it is well known that the attention of the network may not always be on the semantically important regions of the scene. It has been observed that…

Computer Vision and Pattern Recognition · Computer Science 2022-02-10 Maliha Arif , Calvin Yong , Abhijit Mahalanobis

Accurate and fast segmentation of medical images is clinically essential, yet current research methods include convolutional neural networks with fast inference speed but difficulty in learning image contextual features, and transformer…

Computer Vision and Pattern Recognition · Computer Science 2023-02-24 Weihu Song , Heng Yu , Jianhua Wu

Deep learning has been widely accepted as a promising solution for medical image segmentation, given a sufficiently large representative dataset of images with corresponding annotations. With ever increasing amounts of annotated medical…

Computer Vision and Pattern Recognition · Computer Science 2019-03-19 Firat Ozdemir , Philipp Fuernstahl , Orcun Goksel
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