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We consider multivariate two-sample tests of means, where the location shift between the two populations is expected to be related to a known graph structure. An important application of such tests is the detection of differentially…

Quantitative Methods · Quantitative Biology 2014-05-16 Laurent Jacob , Pierre Neuvial , Sandrine Dudoit

A graphical model is a statistical model that is associated to a graph whose nodes correspond to variables of interest. The edges of the graph reflect allowed conditional dependencies among the variables. Graphical models admit…

Methodology · Statistics 2016-06-09 Mathias Drton , Marloes H. Maathuis

Directed acyclic graphs (DAGs) are commonly used to model causal relationships among random variables. In general, learning the DAG structure is both computationally and statistically challenging. Moreover, without additional information,…

Machine Learning · Statistics 2024-03-26 Ali Shojaie , Wenyu Chen

The parametric geometry of numbers has allowed to visualize the simultaneous approximation properties of a collection of real numbers through the combined graph of the related successive minima functions. Several inequalities among…

Number Theory · Mathematics 2021-03-18 Wolfgang M. Schmidt , Leonhard Summerer

Probabilistic graphical models offer a powerful framework to account for the dependence structure between variables, which is represented as a graph. However, the dependence between variables may render inference tasks intractable. In this…

On signed social networks, balanced and unbalanced triangles are a critical motif due to their role as the foundations of Structural Balance Theory. The uses for these motifs have been extensively explored in networks with known edge signs,…

Data Structures and Algorithms · Computer Science 2026-02-17 Alexander Zhou , Haoyang Li , Anxin Tian , Zhiyuan Li , Yue Wang

Graph rewiring has emerged as a key technique to alleviate over-squashing in Graph Neural Networks (GNNs) and Graph Transformers by modifying the graph topology to improve information flow. While effective, rewiring inherently alters the…

Machine Learning · Computer Science 2025-10-24 Alexandre Benoit , Catherine Aitken , Yu He

Graph Neural Networks (GNNs) rely on the graph structure to define an aggregation strategy where each node updates its representation by combining information from its neighbours. A known limitation of GNNs is that, as the number of layers…

Machine Learning · Computer Science 2022-01-19 Davide Buffelli , Fabio Vandin

This paper studies how to capture dependency graph structures from real data which may not be Gaussian. Starting from marginal loss functions not necessarily derived from probability distributions, we utilize an additive…

Machine Learning · Statistics 2019-12-03 Yiyuan She , Shao Tang , Qiaoya Zhang

This article investigates the performance of grid computing systems whose interconnections are given by random and scale-free complex network models. Regular networks, which are common in parallel computing architectures, are also used as a…

Statistical Mechanics · Physics 2009-11-10 Luciano da Fontoura Costa , Gonzalo Travieso , Carlos Antonio Ruggiero

In this paper we are concerned with various graph invariants (girth, diameter, expansion constants, eigenvalues of the Laplacian, tree number) and their analogs for weighted graphs -- weighing the graph changes a combinatorial problem to…

Combinatorics · Mathematics 2007-05-23 Dmitry Jakobson , Igor Rivin

Graphs serve as generic tools to encode the underlying relational structure of data. Often this graph is not given, and so the task of inferring it from nodal observations becomes important. Traditional approaches formulate a convex inverse…

Machine Learning · Computer Science 2024-06-24 Max Wasserman , Gonzalo Mateos

We present a comparison study between a cluster and factor graph representation of LDPC codes. In probabilistic graphical models, cluster graphs retain useful dependence between random variables during inference, which are advantageous in…

Information Theory · Computer Science 2023-10-03 J du Toit , J du Preez , R Wolhuter

Traditionally, graph quality metrics focus on readability, but recent studies show the need for metrics which are more specific to the discovery of patterns in graphs. Cluster analysis is a popular task within graph analysis, yet there is…

Data Structures and Algorithms · Computer Science 2019-08-22 Amyra Meidiana , Seok-Hee Hong , Peter Eades , Daniel Keim

Graph classification aims to categorize graphs based on their structural and attribute features, with applications in diverse fields such as social network analysis and bioinformatics. Among the methods proposed to solve this task, those…

Machine Learning · Computer Science 2025-07-23 Lucas Potin , Rosa Figueiredo , Vincent Labatut , Christine Largeron

Network architecture design is very important for the optimization of industrial networks. The type of network architecture can be divided into small-scale network and large-scale network according to its scale. Graph theory is an efficient…

Social and Information Networks · Computer Science 2022-09-20 Chao Dong , Xiaoxiong Xiong , Qiulin Xue , Zhengzhen Zhang , Kai Niu , Ping Zhang

We suggest a general oracle-based framework that captures different parallel stochastic optimization settings described by a dependency graph, and derive generic lower bounds in terms of this graph. We then use the framework and derive…

Optimization and Control · Mathematics 2019-02-12 Blake Woodworth , Jialei Wang , Adam Smith , Brendan McMahan , Nathan Srebro

A generic method for combinatorial constructions of intrinsic geometrical spaces is presented. It is based on the well known inverse sequences of finite graphs that determine (in the limit) topological spaces. If a pattern of the…

Computational Geometry · Computer Science 2020-10-09 Stanislaw Ambroszkiewicz

Many real-world complex networks are best modeled as bipartite (or 2-mode) graphs, where nodes are divided into two sets with links connecting one side to the other. However, there is currently a lack of methods to analyze properly such…

Social and Information Networks · Computer Science 2011-10-28 Oussama Allali , Lionel Tabourier , Clémence Magnien , Matthieu Latapy

According to the structural balance theory, a signed graph is considered structurally balanced when it can be partitioned into a number of modules such that positive and negative edges are respectively located inside and between the…

Optimization and Control · Mathematics 2023-05-18 Nejat Arinik , Vincent Labatut , Rosa Figueiredo
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