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Chromosome conformation capture experiments such as Hi-C are used to map the three-dimensional spatial organization of genomes. One specific feature of the 3D organization is known as topologically associating domains (TADs), which are…

Applications · Statistics 2019-10-18 Y. X. Rachel Wang , Purnamrita Sarkar , Oana Ursu , Anshul Kundaje , Peter J. Bickel

The lattice gauge theory technique for non-perturbative calculations in QCD is reviewed. The extraction of the continuum limit of lattice results is discussed with particular examples appropriate to hadron spectroscopy (the light hadrons…

High Energy Physics - Phenomenology · Physics 2007-05-23 C. Michael

The current understanding of finite temperature phase transitions in QCD is reviewed. A critical discussion of refined phase transition criteria in numerical lattice simulations and of analytical tools going beyond the mean-field level in…

High Energy Physics - Lattice · Physics 2008-11-26 Hildegard Meyer-Ortmanns

Because of the mass gap, lattice QCD simulations exhibit stochastic locality: distant regions of the lattice fluctuate independently. There is a long history of exploiting this to increase statistics by obtaining multiple…

High Energy Physics - Lattice · Physics 2023-12-01 Mattia Bruno , Marco Cè , Anthony Francis , Patrick Fritzsch , Jeremy R. Green , Maxwell T. Hansen , Antonio Rago

As an elaboration of the analytic approach to Quantum Chromodynamics (QCD), a new model for the QCD analytic running coupling is proposed. A self-evident advantage of the new analytic running coupling (NARC) is that it incorporates the…

High Energy Physics - Phenomenology · Physics 2017-08-23 A. V. Nesterenko

Quantum Monte Carlo methods have proved very valuable to study the structure and reactions of light nuclei and nucleonic matter starting from realistic nuclear interactions and currents. These ab-initio calculations reproduce many low-lying…

Multivariate (MTV) porous materials exhibit unique structural complexities based on diverse spatial arrangements of multiple building block combinations. These materials possess potential synergistic functionalities that exceed the sum of…

Quantum Physics · Physics 2025-05-12 Shinyoung Kang , Younghun Kim , Jihan Kim

Large Momentum Effective Theory (LaMET) provides a general framework for computing the multi-dimensional partonic structure of the proton from first principles using lattice quantum chromodynamics (QCD). In this effective field theory…

High Energy Physics - Lattice · Physics 2026-03-04 Yong Zhao

The charge transfer effect is an important component in the physical description of realistic proteins. In the hybrid quantum mechanical-molecular mechanical (QM/MM) simulations, the significant charge transfer between the QM/MM boundaries…

Chemical Physics · Physics 2019-05-03 Jiajun Yang , Fang Liu , Dongju Zhang , Likai Du

Many complex networks, ranging from social to biological systems, exhibit structural patterns consistent with an underlying hyperbolic geometry. Revealing the dimensionality of this latent space can disentangle the structural complexity of…

We report on the implementation of a time-multiplexed click detection scheme to probe quantum correlations between different spatial optical modes. We demonstrate that such measurement setups can uncover nonclassical correlations in…

Quantum Physics · Physics 2015-07-08 J. Sperling , M. Bohmann , W. Vogel , G. Harder , B. Brecht , V. Ansari , C. Silberhorn

We propose a hierarchy of multi-level kinetic Monte Carlo methods for sampling high-dimensional, stochastic lattice particle dynamics with complex interactions. The method is based on the efficient coupling of different spatial resolution…

Numerical Analysis · Mathematics 2012-08-06 Evangelia Kalligiannaki , Markos A. Katsoulakis , Petr Plechac

We implement a computational pipeline based on a recent machine learning technique, namely the Topological Data Analysis (TDA), that has the capability of extracting powerful information-carrying topological features. We apply such a method…

Strongly Correlated Electrons · Physics 2025-03-11 Andrea Tirelli , Natanael C. Costa

Unlike some models whose relevance to Nature is still a big question mark, Quantum Chromodynamics will stay with us forever. Quantum Chromodynamics (QCD), born in 1973, is a very rich theory supposed to describe the widest range of strong…

High Energy Physics - Theory · Physics 2009-11-11 M. Shifman

Exploring nuclear physics through the fundamental constituents of the strong force -- quarks and gluons -- is a formidable challenge. While numerical calculations using lattice quantum chromodynamics offer the most promising approach for…

High Energy Physics - Lattice · Physics 2024-12-19 Debsubhra Chakraborty , Piyush Srivastava , Arpith Kumar , Nilmani Mathur

Detecting topological order in cold-atom experiments is an ongoing challenge, the resolution of which offers novel perspectives on topological matter. In material systems, unambiguous signatures of topological order exist for topological…

Quantum Gases · Physics 2013-04-25 N. Goldman , J. Dalibard , A. Dauphin , F. Gerbier , M. Lewenstein , P. Zoller , I. B. Spielman

We investigate the performance of the hybrid Monte Carlo algorithm, the standard algorithm used for lattice QCD simulations involving fermions, in updating non-trivial global topological structures. We find that the hybrid Monte Carlo…

High Energy Physics - Lattice · Physics 2016-08-15 B. Allés , G. Boyd , M. D'Elia , A. Di Giacomo , E. Vicari

Texture is a visual attribute largely used in many problems of image analysis. Currently, many methods that use learning techniques have been proposed for texture discrimination, achieving improved performance over previous handcrafted…

Computer Vision and Pattern Recognition · Computer Science 2020-08-19 Lucas C. Ribas , Leonardo F. S. Scabini , Jarbas Joaci de Mesquita Sá Junior , Odemir M. Bruno

One important question in neuroscience is how global behavior in a brain network emerges from the interplay between network connectivity and the neural dynamics of individual nodes. To better understand this theoretical relationship, we…

Neurons and Cognition · Quantitative Biology 2022-09-13 Anca Radulescu , Johan Nakuci , Simone Evans , Sarah Muldoon

A novel technique using machine learning (ML) to reduce the computational cost of evaluating lattice quantum chromodynamics (QCD) observables is presented. The ML is trained on a subset of background gauge field configurations, called the…

High Energy Physics - Lattice · Physics 2019-07-24 Boram Yoon , Tanmoy Bhattacharya , Rajan Gupta
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