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We compute spectra of symmetric random matrices defined on graphs exhibiting a modular structure. Modules are initially introduced as fully connected sub-units of a graph. By contrast, inter-module connectivity is taken to be incomplete.…

Disordered Systems and Neural Networks · Physics 2009-08-24 G. Ergun , R. Kuehn

Large graphs can be found in a wide array of scientific fields ranging from sociology and biology to scientometrics and computer science. Their analysis is by no means a trivial task due to their sheer size and complex structure. Such…

Social and Information Networks · Computer Science 2017-02-24 Georgios Drakopoulos , Stavros Kontopoulos , Christos Makris , Vasileios Megalooikonomou

Predator-prey networks originating from different aqueous and terrestrial environments are compared to assess if the difference in environments of these networks produce any significant difference in the structure of such predator-prey…

Populations and Evolution · Quantitative Biology 2019-01-11 Shashankaditya Upadhyay , Sudeepto Bhattacharya

Graph neural networks have been shown to be very effective in utilizing pairwise relationships across samples. Recently, there have been several successful proposals to generalize graph neural networks to hypergraph neural networks to…

Machine Learning · Computer Science 2024-02-21 Michael Ng , Hanrui Wu , Andy Yip

Uncovering structural patterns in collaboration networks is key for understanding how knowledge flows and innovation emerges. These networks often exhibit a rich interplay of meso-scale structures, such as communities, core-periphery…

Methodology · Statistics 2025-11-25 Sara Geremia , Domenico De Stefano , Michael Fop

For many graph-related problems, it can be essential to have a set of structurally diverse graphs. For instance, such graphs can be used for testing graph algorithms or their neural approximations. However, to the best of our knowledge, the…

Machine Learning · Computer Science 2024-12-13 Fedor Velikonivtsev , Mikhail Mironov , Liudmila Prokhorenkova

Whenever graphs admit equitable partitions, their quotient graphs highlight the structure evidenced by the partition. It is therefore very natural to ask what can be said about two graphs that have the same quotient according to certain…

Combinatorics · Mathematics 2024-11-15 Frederico Cançado , Gabriel Coutinho

Dynamical networks are powerful tools for modeling a broad range of complex systems, including financial markets, brains, and ecosystems. They encode how the basic elements (nodes) of these systems interact altogether (via links) and evolve…

Physics and Society · Physics 2019-03-13 Edward Laurence , Nicolas Doyon , Louis J Dubé , Patrick Desrosiers

Breaking of equivalence between the microcanonical ensemble and the canonical ensemble, describing a large system subject to hard and soft constraints, respectively, was recently shown to occur in large random graphs. Hard constraints must…

Probability · Mathematics 2017-06-06 Diego Garlaschelli , Frank den Hollander , Andrea Roccaverde

Motivated by chemical applications, we revisit and extend a family of positive definite kernels for graphs based on the detection of common subtrees, initially proposed by Ramon et al. (2003). We propose new kernels with a parameter to…

Quantitative Methods · Quantitative Biology 2016-08-16 Pierre Mahé , Jean-Philippe Vert

Network representations are useful for describing the structure of a large variety of complex systems. Although most studies of real-world networks suppose that nodes are connected by only a single type of edge, most natural and engineered…

Physics and Society · Physics 2020-08-05 Rubén J. Sánchez-García , Emanuele Cozzo , Yamir Moreno

We consider community detection from multiple correlated graphs sharing the same community structure. The correlated graphs are generated by independent subsampling of a parent graph sampled from the stochastic block model. The vertex…

Information Theory · Computer Science 2023-09-12 Joonhyuk Yang , Hye Won Chung

Neural networks are often represented as graphs of connections between neurons. However, despite their wide use, there is currently little understanding of the relationship between the graph structure of the neural network and its…

Machine Learning · Computer Science 2020-08-28 Jiaxuan You , Jure Leskovec , Kaiming He , Saining Xie

A simple but efficient spectral approach for analyzing the community structure of complex networks is introduced. It works the same way for all types of networks, by spectrally splitting the adjacency matrix into a "unipartite" and a…

Physics and Society · Physics 2016-02-05 Bogdan Danila

We introduce an unsupervised graph embedding that trades off local node similarity and connectivity, and global structure. The embedding is based on a generalized graph Laplacian, whose eigenvectors compactly capture both network structure…

Machine Learning · Computer Science 2020-10-01 Shay Deutsch , Stefano Soatto

In this work we introduce a concept of complexity for undirected graphs in terms of the spectral analysis of the Laplacian operator defined by the incidence matrix of the graph. Precisely, we compute the norm of the vector of eigenvalues of…

Information Theory · Computer Science 2022-03-23 Diego M. Mateos , Federico Morana , Hugo Aimar

Large-scale graphs are widely used to represent object relationships in many real world applications. The occurrence of large-scale graphs presents significant computational challenges to process, analyze, and extract information. Graph…

Social and Information Networks · Computer Science 2019-10-11 Yu Jin , Andreas Loukas , Joseph F. JaJa

We discuss the problem of extending data mining approaches to cases in which data points arise in the form of individual graphs. Being able to find the intrinsic low-dimensionality in ensembles of graphs can be useful in a variety of…

Data Analysis, Statistics and Probability · Physics 2013-06-18 Karthikeyan Rajendran , Ioannis G. Kevrekidis

We construct a correlation matrix based financial network for a set of New York Stock Exchange (NYSE) traded stocks with stocks corresponding to nodes and the links between them added one after the other, according to the strength of the…

Physics and Society · Physics 2007-05-23 G. Tibely , J. -P. Onnela , J. Saramaki , K. Kaski , J. Kertesz

We introduce a mapping between graphs and pure quantum bipartite states and show that the associated entanglement entropy conveys non-trivial information about the structure of the graph. Our primary goal is to investigate the family of…

Quantum Physics · Physics 2012-02-24 Silvano Garnerone , Paolo Giorda , Paolo Zanardi
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