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Many empirical networks originate from correlational data, arising in domains as diverse as psychology, neuroscience, genomics, microbiology, finance, and climate science. Specialized algorithms and theory have been developed in different…

Physics and Society · Physics 2025-07-15 Naoki Masuda , Zachary M. Boyd , Diego Garlaschelli , Peter J. Mucha

This work deals with the generation of theoretical correlation matrices with specific sparsity patterns, associated to graph structures. We present a novel approach based on convex optimization, offering greater flexibility compared to…

Signal Processing · Electrical Eng. & Systems 2025-02-26 Ali Fakhar , Kévin Polisano , Irène Gannaz , Sophie Achard

Many researchers have hypothesised models which explain the evolution of the topology of a target network. The framework described in this paper gives the likelihood that the target network arose from the hypothesised model. This allows…

Applications · Statistics 2013-03-28 Richard G. Clegg , Raul Landa , Hamed Haddadi , M. Rio

Correlation matrices are a major type of multivariate data. To examine properties of a given correlation matrix, a common practice is to compare the same quantity between the original correlation matrix and reference correlation matrices,…

Physics and Society · Physics 2018-07-25 Naoki Masuda , Sadamori Kojaku , Yukie Sano

Optimization networks are a new methodology for holistically solving interrelated problems that have been developed with combinatorial optimization problems in mind. In this contribution we revisit the core principles of optimization…

(a) We propose a ``static'' construction procedure for random networks with given correlations of the degrees of the nearest-neighbor vertices. This is an equilibrium graph, maximally random under the constraint that its degree-degree…

Statistical Mechanics · Physics 2007-05-23 S. N. Dorogovtsev , J. F. F. Mendes , A. N. Samukhin

This paper introduces a method to generate hierarchically modular networks with prescribed node degree list by link switching. Unlike many existing network generating models, our method does not use link probabilities to achieve modularity.…

Other Computer Science · Computer Science 2009-07-05 Susan Khor

Seeking effective neural networks is a critical and practical field in deep learning. Besides designing the depth, type of convolution, normalization, and nonlinearities, the topological connectivity of neural networks is also important.…

Computer Vision and Pattern Recognition · Computer Science 2020-08-20 Kun Yuan , Quanquan Li , Jing Shao , Junjie Yan

Many real-world networks exhibit correlations between the node degrees. For instance, in social networks nodes tend to connect to nodes of similar degree. Conversely, in biological and technological networks, high-degree nodes tend to be…

Discrete Mathematics · Computer Science 2015-09-30 Kevin E. Bassler , Charo I. Del Genio , Péter L. Erdős , István Miklós , Zoltán Toroczkai

A general Bayesian framework for model selection on random network models regarding their features is considered. The goal is to develop a principle Bayesian model selection approach to compare different fittable, not necessarily nested,…

Methodology · Statistics 2020-04-30 Papamichalis Marios

This work deals with the generation of theoretical correlation matrices with specific sparsity patterns, associated to graph structures. We present a novel approach based on convex optimization, offering greater flexibility compared to…

Signal Processing · Electrical Eng. & Systems 2025-09-03 Ali Fahkar , Kévin Polisano , Irène Gannaz , Sophie Achard

We consider the problem of automatically generating networks from data of collaborating researchers. The objective is to apply network analysis on the resulting network layers to reveal supplemental patterns and insights of the research…

Social and Information Networks · Computer Science 2019-02-26 Saharnaz E. Dilmaghani , Apivadee Piyatumrong , Pascal Bouvry , Matthias R. Brust

For general connections, the problem of finding network codes and optimizing resources for those codes is intrinsically difficult and little is known about its complexity. Most of the existing solutions rely on very restricted classes of…

Information Theory · Computer Science 2015-03-02 Ying Cui , Muriel Médard , Edmund Yeh , Douglas Leith , Ken Duffy

Networks are a useful representation for data on connections between units of interests, but the observed connections are often noisy and/or include missing values. One common approach to network analysis is to treat the network as a…

Methodology · Statistics 2017-05-22 Yun-Jhong Wu , Elizaveta Levina , Ji Zhu

Many real networks such as the World Wide Web, financial, biological, citation and social networks have a power-law degree distribution. Networks with this feature are also called scale-free. Several models for producing scale-free networks…

Social and Information Networks · Computer Science 2016-12-23 Akmal Artikov , Aleksandr Dorodnykh , Yana Kashinskaya , Egor Samosvat

We develop a statistical theory to characterize correlations in weighted networks. We define the appropriate metrics quantifying correlations and show that strictly uncorrelated weighted networks do not exist due to the presence of…

Disordered Systems and Neural Networks · Physics 2009-11-11 M. Angeles Serrano , Marian Boguna , Romualdo Pastor-Satorras

In order to detect patterns in real networks, randomized graph ensembles that preserve only part of the topology of an observed network are systematically used as fundamental null models. However, their generation is still problematic. The…

Data Analysis, Statistics and Probability · Physics 2014-01-14 Tiziano Squartini , Diego Garlaschelli

This study presents a generalization for a method examining the correlation function of an arbitrary system with interactions in an Ising model to obtain a value of correlation between two arbitrary points on a network. The establishment of…

General Physics · Physics 2017-06-13 Akira Saito

We describe a method to construct directed networks from multivariate time series which has several advantages over the widely accepted methods. This method is based on an information theoretic reduction of linear (auto-regressive) models.…

Data Analysis, Statistics and Probability · Physics 2018-08-13 Toshihiro Tanizawa , Tomomichi Nakamura , Fumihiko Taya , Michael Small

Network visualization is essential for many scientific, societal, technological and artistic domains. The primary goal is to highlight patterns out of nodes interconnected by edges that are easy to understand, facilitate communication and…

Physics and Society · Physics 2024-06-18 Fabrizio De Vico Fallani , Thibault Rolland
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