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Several meters below the coastal ocean surface there are areas of high ecological activity that contain thin layers of concentrated motile phytoplankton. Gyrotactic trapping has been proposed as a potential mechanism for layer formation of…

Fluid Dynamics · Physics 2019-05-22 Smitha Maretvadakethope , Eric E. Keaveny , Yongyun Hwang

The motility of microorganisms is often biased by gradients in physical and chemical properties of their environment, with myriad implications on their ecology. Here we show that fluid acceleration reorients gyrotactic plankton, triggering…

Phytoplankton patchiness, namely the heterogeneous distribution of microalgae over multiple spatial scales, dramatically impacts marine ecology. A spectacular example of such heterogeneity occurs in thin phytoplankton layers (TPLs), where…

Fluid Dynamics · Physics 2014-11-24 Francesco Santamaria , Filippo De Lillo , Massimo Cencini , Guido Boffetta

We study the spatial distribution of gyrotactic microorganisms transported by a three-dimensional turbulent flow generated by direct numerical simulations. We find that gyrotaxis combines with turbulent fluctuations to produce small scales…

Chaotic Dynamics · Physics 2012-06-13 Filippo De Lillo , Guido Boffetta , Massimo Cencini

A suspension of gyrotactic microalgae Chlamydomonas augustae swimming in a cylindrical water vessel in solid-body rotation is studied. Our experiments show that swimming algae form an aggregate around the axis of rotation, whose intensity…

Fluid Dynamics · Physics 2015-11-05 M. Cencini , M. Franchino , F. Santamaria , G. Boffetta

Shear flow significantly affects the transport of swimming algae in suspension. For example, viscous and gravitational torques bias bottom-heavy cells to swim towards regions of downwelling fluid (gyrotaxis). It is necessary to understand…

Biological Physics · Physics 2015-03-20 O. A. Croze , G. Sardina , M. Ahmed , M. A. Bees , L. Brandt

Many plankton species undergo daily vertical migration to large depths in the turbulent ocean. To do this efficiently, the plankton can use a gyrotactic mechanism, aligning them with gravity to swim downwards, or against gravity to swim…

Fluid Dynamics · Physics 2021-12-17 Jingran Qiu , Navid Mousavi , Lihao Zhao , Kristian Gustavsson

We study the dynamics and the statistics of dilute suspensions of gyrotactic swimmers, a model for many aquatic motile microorganisms. By means of extensive numerical simulations of the Navier-Stokes equations at different Reynolds numbers,…

Fluid Dynamics · Physics 2021-04-13 Matteo Borgnino , Guido Boffetta , Filippo De Lillo , Massimo Cencini

Suspensions of microswimmers are a rich source of fascinating new fluid mechanics. Recently we predicted the active pipe flow dispersion of gyrotactic microalgae, whose orientation is biased by gravity and flow shear. Analytical theory…

Biological Physics · Physics 2017-03-14 O. A. Croze , R. N. Bearon , M. A. Bees

In the past decade the volvocine green algae, spanning from the unicellular $Chlamydomonas$ to multicellular $Volvox$, have emerged as model organisms for a number of problems in biological fluid dynamics. These include flagellar…

Soft Condensed Matter · Physics 2014-09-22 Raymond E. Goldstein

The symmetry breaking of the actin network from radial to longitudinal symmetry has been identified as the major mechanism for keratocytes (fish cells) motility on solid substrate. For strong friction coefficient, the two dimensional actin…

Soft Condensed Matter · Physics 2011-02-16 M. Ben Amar , O. V. Manyuhina , G. Napoli

Turbulence plays a major role in shaping marine community structure as it affects organism dispersal and guides fundamental ecological interactions. Below oceanographic mesoscale dynamics, turbulence also impinges on subtle…

Biological Physics · Physics 2019-10-29 Matteo Borgnino , Jorge Arrieta , Guido Boffetta , Filippo De Lillo , Idan Tuval

Interaction of swimming bacteria with flows controls their ability to explore complex environments, crucial to many societal and environmental challenges and relevant for microfluidic applications as cell sorting. Combining experimental,…

Soft Condensed Matter · Physics 2020-09-03 Guangyin Jing , Andreas Zöttl , Éric Clément , Anke Lindner

We study the distribution of swimming micro-organisms advected by a model turbulent flow and attracted towards a localised light source through phototaxis. It is shown that particles aggregate along a dynamical attractor with fractal…

Mathematical Physics · Physics 2009-11-13 Colin Torney , Zoltan Neufeld

Phyllotaxis describes the arrangement of florets, scales or leaves in composite flowers or plants (daisy, aster, sunflower, pinecone, pineapple). As a structure, it is a geometrical foam, the most homogeneous and densest covering of a large…

Soft Condensed Matter · Physics 2016-02-02 Nicolas Rivier , Jean-François Sadoc , Jean Charvolin

The motility of a fish keratocyte on a flat substrate exhibits two distinct regimes: the non-migrating and the migrating one. In both configurations the shape is fixed in time and, when the cell is moving, the velocity is constant in…

Cell Behavior · Quantitative Biology 2016-06-29 Davide Ambrosi , Anna Zanzottera

The primary objective of this article is to explore how rotation influences the initiation of phototactic bioconvection. This investigation is conducted through the application of linear stability theory to a suspension composed of…

Soft Condensed Matter · Physics 2023-09-21 S. K. Rajput

Turbulence has been recognized as a factor of paramount importance for the survival or extinction of sinking phytoplankton species. However, dealing with its multiscale nature in models of coupled fluid and biological dynamics is a…

Fluid Dynamics · Physics 2021-12-10 Vinicius Beltram Tergolina , Enrico Calzavarini , Gilmar Mompean , Stefano Berti

Some micro-algae are sensitive to light intensity gradients. This property is known as phototaxis: the algae swim toward a light source (positive phototaxis). We use this property to control the motion of micro-algae within a Poiseuille…

Soft Condensed Matter · Physics 2015-06-12 Xabel Garcia , Salima Rafaï , Philippe Peyla

Biological tissues have been observed to display emergent fluid-like properties, owing to physical interactions between cells. However, it remains unclear in general how these fluid-like properties affect tissue structure and function.…

Soft Condensed Matter · Physics 2026-02-24 Giulia L. Celora , Benjamin J. Walker , Mohit P. Dalwadi , Philip Pearce
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