Related papers: An intracellular calcium frequency code model exte…
Multi-electrode arrays covering several square millimeters of neural tissue provide simultaneous access to population signals such as extracellular potentials and spiking activity of one hundred or more individual neurons. The…
In radiation damage cascade displacement spikes ions and electrons can reach very high temperatures and be out of thermal equilibrium. Correct modelling of cascades with molecular dynamics should allow for the non-adiabatic exchange of…
Interacting particle systems in a finite-volume in equilibrium are often described by a grand-canonical ensemble induced by the corresponding Hamiltonian, i.e. a finite-volume Gibbs measure. However, in practice, directly measuring this…
The electrostatic potential of a moving dust grain in a complex plasma with magnetized ions is computed using linear response theory, thereby extending our previous work for unmagnetized plasmas [P. Ludwig et al., New J. Phys. 14, 053016…
Antiferroelectric liquid crystals can be considered as a promising alternative to nematic mixtures in the area of microdisplays. Switching behaviour of the molecules has been modelled as two adjacent smectic layers. However, some studies…
The in silico simulations are widely used in contemporary systems biology including the analysis of nerve pulse propagation. As known from numerous experiments, the propagation of an action potential is accompanied by mechanical and thermal…
Computation of biological processes creates great promise for everyday life and great challenges for physical scientists. Simulations of molecular dynamics appeal to biologists as a natural extension of structural biology. Once biologists…
In the application of potential models, the use of the Dirac equation in central potentials remains of phenomenological interest. The associated set of decoupled second-order ordinary differential equations is here studied by exploiting the…
Assuming a logarithmic interaction between constituent particles, compact and locally accurate wave functions that describe bound states of the two-particle neutral and three-particle charged complexes in two dimensions are designed. Prime…
In the extended chiral constituent quark model, the intrinsic $c \bar{c}$ content of the nucleon is investigated. The probabilities of the quark-antiquark components in the nucleon wave functions are calculated by taking the nucleon to be…
A new potential class of nanolaminated and structurally complex materials, herein conceived as the Zigzag IntermetAllic (ZIA) phases, is proposed. A study of the constituent phases of a specific Nb--Si--Ni intermetallic alloy revealed that…
We present a continuum model for symmetry-breaking phase transformations in intercalation compounds, based on Ericksen's multi-well energy formulation. The model predicts the nucleation and growth of crystallographic microstructures in…
Electrokinetic effects offer a method of choice to control flows in micro and nanofluidic systems. While a rather clear picture of these phenomena exists now for the liquid-solid interfaces, the case of liquid-air interfaces remains largely…
Capacity formulas and random-coding exponents are derived for a generalized family of Gel'fand-Pinsker coding problems. These exponents yield asymptotic upper bounds on the achievable log probability of error. In our model, information is…
Polymer chains in colloid-polymer mixtures can be coarse-grained by replacing them with single soft particles interacting via effective polymer-polymer and polymer-colloid pair potentials. Here we describe in detail how Ornstein-Zernike…
We generalize earlier studies on the Laplacian for a bounded open domain $\Omega\in \real^2$ with connected complement and piecewise smooth boundary. We compare it with the quantum mechanical scattering operator for the exterior of this…
Recently a formulation of overlap fermions at finite density based on an analytic continuation of the sign function was proposed. We study this proposal by analyzing the energy and number densities for free fermions as a function of the…
A quantum model on the chemically and physically induced pluripotency in stem cells is proposed. Based on the conformational Hamiltonian and the idea of slow variables (molecular torsions) slaving fast ones the conversion from the…
Neurons rely on two interdependent mechanisms, homeostasis and neuromodulation, to maintain robust and adaptable functionality. Calcium homeostasis stabilizes neuronal activity by adjusting ionic conductances, whereas neuromodulation…
The chemical potential of a component in a solution is defined as the free energy change as the amount of the component changes. Computing this fundamental thermodynamic property from atomistic simulations is notoriously difficult, because…