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Organ segmentation of plant point clouds is a prerequisite for the high-resolution and accurate extraction of organ-level phenotypic traits. Although the fast development of deep learning has boosted much research on segmentation of plant…

Computer Vision and Pattern Recognition · Computer Science 2025-10-28 Xin Yang , Ruiming Du , Hanyang Huang , Jiayang Xie , Pengyao Xie , Leisen Fang , Ziyue Guo , Nanjun Jiang , Yu Jiang , Haiyan Cen

Magnetic Resonance Imaging (MRI) is a powerful imaging technique widely used for visualizing structures within the human body and in other fields such as plant sciences. However, there is a demand to develop fast 3D-MRI reconstruction…

Image and Video Processing · Electrical Eng. & Systems 2025-12-09 Arya Bangun , Zhuo Cao , Alessio Quercia , Hanno Scharr , Elisabeth Pfaehler

The quantitative analysis of 3D confocal microscopy images of the shoot apical meristem helps understanding the growth process of some plants. Cell segmentation in these images is crucial for computational plant analysis and many automated…

Computer Vision and Pattern Recognition · Computer Science 2017-10-30 Thiago V. Spina , Johannes Stegmaier , Alexandre X. Falcão , Elliot Meyerowitz , Alexandre Cunha

Though performed almost effortlessly by humans, segmenting 2D gray-scale or color images into respective regions of interest (e.g.~background, objects, or portions of objects) constitutes one of the greatest challenges in science and…

Computer Vision and Pattern Recognition · Computer Science 2023-08-23 Alexandre Benatti , Luciano da F. Costa

This work leverages neural radiance fields and remote sensing for forestry applications. Here, we show neural radiance fields offer a wide range of possibilities to improve upon existing remote sensing methods in forest monitoring. We…

Computer Vision and Pattern Recognition · Computer Science 2024-01-29 Juan Castorena

The precise characterization of plant morphology provides valuable insights into plant environment interactions and genetic evolution. A key technology for extracting this information is 3D segmentation, which delineates individual plant…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Ruiming Du , Guangxun Zhai , Tian Qiu , Yu Jiang

The binary segmentation of roads in very high resolution (VHR) remote sensing images (RSIs) has always been a challenging task due to factors such as occlusions (caused by shadows, trees, buildings, etc.) and the intra-class variances of…

Computer Vision and Pattern Recognition · Computer Science 2021-06-30 Lei Ding , Lorenzo Bruzzone

We evaluate different Neural Radiance Fields (NeRFs) techniques for the 3D reconstruction of plants in varied environments, from indoor settings to outdoor fields. Traditional methods usually fail to capture the complex geometric details of…

Computer Vision and Pattern Recognition · Computer Science 2024-08-07 Muhammad Arbab Arshad , Talukder Jubery , James Afful , Anushrut Jignasu , Aditya Balu , Baskar Ganapathysubramanian , Soumik Sarkar , Adarsh Krishnamurthy

Three-dimensional segmentation in magnetic resonance images (MRI), which reflects the true shape of the objects, is challenging since high-resolution isotropic MRIs are rare and typical MRIs are anisotropic, with the out-of-plane dimension…

Image and Video Processing · Electrical Eng. & Systems 2023-03-15 Hanxue Gu , Hongyu He , Roy Colglazier , Jordan Axelrod , Robert French , Maciej A Mazurowski

In this paper, multiple instance learning (MIL) algorithms to automatically perform root detection and segmentation in minirhizotron imagery using only image-level labels are proposed. Root and soil characteristics vary from location to…

Computer Vision and Pattern Recognition · Computer Science 2020-05-26 Guohao Yu , Alina Zare , Hudanyun Sheng , Roser Matamala , Joel Reyes-Cabrera , Felix B. Fritschi , Thomas E. Juenger

Magnetic resonance imaging (MRI) is extensively used for diagnosis and image-guided therapeutics. Due to hardware, physical and physiological limitations, acquisition of high-resolution MRI data takes long scan time at high system cost, and…

Medical Physics · Physics 2018-10-17 Qing Lyu , Chenyu You , Hongming Shan , Ge Wang

Automated segmentation of individual leaves of a plant in an image is a prerequisite to measure more complex phenotypic traits in high-throughput phenotyping. Applying state-of-the-art machine learning approaches to tackle leaf instance…

Computer Vision and Pattern Recognition · Computer Science 2019-03-25 Daniel Ward , Peyman Moghadam , Nicolas Hudson

Magnetic resonance imaging (MRI) reconstruction is a fundamental task aimed at recovering high-quality images from undersampled or low-quality MRI data. This process enhances diagnostic accuracy and optimizes clinical applications. In…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 Xiaoyan Kui , Zijie Fan , Zexin Ji , Qinsong Li , Chengtao Liu , Weixin Si , Beiji Zou

Advances in fluorescence microscopy enable acquisition of 3D image volumes with better image quality and deeper penetration into tissue. Segmentation is a required step to characterize and analyze biological structures in the images and…

Computer Vision and Pattern Recognition · Computer Science 2019-04-16 Chichen Fu , Soonam Lee , David Joon Ho , Shuo Han , Paul Salama , Kenneth W. Dunn , Edward J. Delp

The complex background in the soil image collected in the field natural environment will affect the subsequent soil image recognition based on machine vision. Segmenting the soil center area from the soil image can eliminate the influence…

Computer Vision and Pattern Recognition · Computer Science 2024-07-26 Yida Chen , Kang Liu , Yi Xin , Xinru Zhao

Medical imaging is essential in healthcare to provide key insights into patient anatomy and pathology, aiding in diagnosis and treatment. Non-invasive techniques such as X-ray, Magnetic Resonance Imaging (MRI), Computed Tomography (CT), and…

Image and Video Processing · Electrical Eng. & Systems 2024-12-04 Fnu Neha , Deepshikha Bhati , Deepak Kumar Shukla , Sonavi Makarand Dalvi , Nikolaos Mantzou , Safa Shubbar

Accurate building segmentation from high-resolution RGB imagery remains challenging due to spectral similarity with non-building features, shadows, and irregular building geometries. In this study, we present a comprehensive deep learning…

Computer Vision and Pattern Recognition · Computer Science 2025-05-09 Chintan B. Maniyar , Minakshi Kumar , Gengchen Mai

With the rapid development of Remote Sensing acquisition techniques, there is a need to scale and improve processing tools to cope with the observed increase of both data volume and richness. Among popular techniques in remote sensing, Deep…

Computer Vision and Pattern Recognition · Computer Science 2017-12-06 A Hamida , A. Benoît , P. Lambert , L Klein , C Amar , N. Audebert , S. Lefèvre

Magnetic resonance imaging (MRI) super-resolution (SR) methods that computationally enhance low-resolution acquisitions to approximate high-resolution quality offer a compelling alternative to expensive high-field scanners. In this work we…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Hendrik Chiche , Ludovic Corcos , Logan Rouge

Direct automatic segmentation of objects from 3D medical imaging, such as magnetic resonance (MR) imaging, is challenging as it often involves accurately identifying a number of individual objects with complex geometries within a large…

Image and Video Processing · Electrical Eng. & Systems 2021-09-23 Wei Dai , Boyeong Woo , Siyu Liu , Matthew Marques , Craig B. Engstrom , Peter B. Greer , Stuart Crozier , Jason A. Dowling , Shekhar S. Chandra