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The material in this note is used as an introduction to distributed algorithms in a four year course on software and automatic control system in the computer technology department of the Komsomolsk-on-Amur state technical university. All…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-01-18 Ahmet A. Husainov

We design and develop a work-efficient multithreaded algorithm for sparse matrix-sparse vector multiplication (SpMSpV) where the matrix, the input vector, and the output vector are all sparse. SpMSpV is an important primitive in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-26 Ariful Azad , Aydin Buluc

Several efficient distributed algorithms have been developed for matrix-matrix multiplication: the 3D algorithm, the 2D SUMMA algorithm, and the 2.5D algorithm. Each of these algorithms was independently conceived and they trade-off memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-29 Rui Li , Yufan Xu , Aravind Sukumaran-Rajam , Atanas Rountev , P Sadayappan

Graph clustering has many important applications in computing, but due to growing sizes of graphs, even traditionally fast clustering methods such as spectral partitioning can be computationally expensive for real-world graphs of interest.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 Julian Shun , Farbod Roosta-Khorasani , Kimon Fountoulakis , Michael W. Mahoney

Matrix multiplication is a fundamental computation in many scientific disciplines. In this paper, we show that novel fast matrix multiplication algorithms can significantly outperform vendor implementations of the classical algorithm and…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-08 Austin R. Benson , Grey Ballard

Numerical investigation of compressible flows faces two main challenges. In order to accurately describe the flow characteristics, high-resolution nonlinear numerical schemes are needed to capture discontinuities and resolve wide…

Computational Physics · Physics 2020-12-09 Nils Hoppe , Stefan Adami , Nikolaus A. Adams

This paper presents a novel meta algorithm, Partition-Merge (PM), which takes existing centralized algorithms for graph computation and makes them distributed and faster. In a nutshell, PM divides the graph into small subgraphs using our…

Data Structures and Algorithms · Computer Science 2013-09-25 Vincent Blondel , Kyomin Jung , Pushmeet Kohli , Devavrat Shah

We develop a novel parallel resampling algorithm for fully parallelized particle filters, which is designed with GPUs (graphics processing units) or similar parallel computing devices in mind. With our new algorithm, a full cycle of…

Computation · Statistics 2016-08-17 Kenichiro McAlinn , Teruo Nakatsuma

An algorithm is discussed for converting a class of recursive processes to a parallel system. It is argued that this algorithm can be superior to certain methods currently found in the literature for an important subset of problems. The…

Computational Physics · Physics 2009-11-10 W. R. Gibbs

Ordering vertices of a graph is key to minimize fill-in and data structure size in sparse direct solvers, maximize locality in iterative solvers, and improve performance in graph algorithms. Except for naturally parallelizable ordering…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-27 Ariful Azad , Mathias Jacquelin , Aydin Buluc , Esmond G. Ng

In this paper, we describe efficient MapReduce simulations of parallel algorithms specified in the BSP and PRAM models. We also provide some applications of these simulation results to problems in parallel computational geometry for the…

Data Structures and Algorithms · Computer Science 2015-03-14 Michael T. Goodrich

Specialized function gradient computing hardware could greatly improve the performance of state-of-the-art optimization algorithms, e.g., based on gradient descent or conjugate gradient methods that are at the core of control, machine…

The Simplex tableau has been broadly used and investigated in the industry and academia. With the advent of the big data era, ever larger problems are posed to be solved in ever larger machines whose architecture type did not exist in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-29 Demetrios Coutinho , Felipe O. Lins e Silva , Daniel Aloise , Samuel , Xavier-de-Souza

Applications to process seismic data employ scalable parallel systems to produce timely results. To fully exploit emerging processor architectures, application will need to employ threaded parallelism within a node and message passing…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-03-15 Sri Raj Paul , John Mellor-Crummey , Mauricio Araya-Polo , Detlef Hohl

We propose a new integrated method of exploiting model, batch and domain parallelism for the training of deep neural networks (DNNs) on large distributed-memory computers using minibatch stochastic gradient descent (SGD). Our goal is to…

Machine Learning · Computer Science 2018-05-17 Amir Gholami , Ariful Azad , Peter Jin , Kurt Keutzer , Aydin Buluc

It has been shown that a class of probabilistic domain models cannot be learned correctly by several existing algorithms which employ a single-link look ahead search. When a multi-link look ahead search is used, the computational complexity…

Artificial Intelligence · Computer Science 2013-02-08 TongSheng Chu , Yang Xiang

The forest-of-octrees approach to parallel adaptive mesh refinement and coarsening (AMR) has recently been demonstrated in the context of a number of large-scale PDE-based applications. Although linear octrees, which store only leaf…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-11-05 Tobin Isaac , Carsten Burstedde , Lucas C. Wilcox , Omar Ghattas

Matrix Distributed Processing (MDP) is a C++ library for fast development of efficient parallel algorithms. It constitues the core of FermiQCD. MDP enables programmers to focus on algorithms, while parallelization is dealt with…

High Energy Physics - Lattice · Physics 2007-05-23 Massimo Di Pierro

We propose efficient parallel algorithms and implementations on shared memory architectures of LU factorization over a finite field. Compared to the corresponding numerical routines, we have identified three main difficulties specific to…

Symbolic Computation · Computer Science 2014-02-17 Jean-Guillaume Dumas , Thierry Gautier , Clément Pernet , Ziad Sultan

We consider a cascade model of $N$ different processors performing a distributed parallel simulation. The main goal of the study is to show that the long-time dynamics of the system has a cluster behavior. To attack this problem we combine…

Probability · Mathematics 2007-05-23 Anatoli Manita , Francois Simonot