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With the purpose of modelling the process of mountain building, we investigate the evolution of the ridge produced by the convergent motion of a system consisting of two layers of liquids that differ in density and viscosity to simulate the…

Geophysics · Physics 2010-06-14 Carlos Alberto Perazzo , Julio Gratton

Inspired by recent experimental observation of patterning at the membrane of a living cell, we propose a generic model for the dynamics of a fluctuating interface driven by particle-like inclusions which stimulate its growth. We find that…

Soft Condensed Matter · Physics 2019-07-25 F. Cagnetta , M. R. Evans , D. Marenduzzo

Cell-based, mathematical modeling of collective cell behavior has become a prominent tool in developmental biology. Cell-based models represent individual cells as single particles or as sets of interconnected particles, and predict the…

Cell Behavior · Quantitative Biology 2019-03-12 Henri B. Wolff , Lance A. Davidson , Roeland M. H. Merks

We present a stochastic model which describes fronts of cells invading a wound. In the model cells can move, proliferate, and experience cell-cell adhesion. We find several qualitatively different regimes of front motion and analyze the…

Cell Behavior · Quantitative Biology 2009-11-13 Evgeniy Khain , Leonard M. Sander , Casey M. Schneider-Mizell

We consider a simple model for the growth of isolated steps on a vicinal crystal surface. It incorporates diffusion and drift of adatoms on the terrace, and strong step and kink edge barriers. Using a combination of analytic methods and…

Materials Science · Physics 2009-10-31 J. Heinonen , I. Bukharev , T. Ala-Nissila , J. M. Kosterlitz

Biological cells can actively tune their intracellular architecture according to their overall shape. Here we explore the rheological implication of such coupling in a minimal model of a dense cellular material where each cell exerts an…

Soft Condensed Matter · Physics 2022-04-13 Shao-Zhen Lin , Matthias Merkel , Jean-François Rupprecht

Biofilms are antibiotic-resistant bacterial aggregates that grow on moist surfaces and can trigger hospital-acquired infections. They provide a classical example in biology where the dynamics of cellular communities may be observed and…

Biological Physics · Physics 2015-02-24 D. R. Espeso , A. Carpio , B. Einarsson

We report experimental and numerical results on the growth of a super stable heap (SSH). Such a regime appears for flows in a thin channel and for high flow rate : the flow occurs atop a nearly static heap whose angle is stabilized by the…

Other Condensed Matter · Physics 2009-11-10 Nicolas Taberlet , Patrick Richard , Etienne Henry , Renaud Delannay

Microbial growth and division are fundamental processes relevant to many areas of life science. Of particular interest are homeostasis mechanisms, which buffer growth and division from accumulating fluctuations over multiple cycles. These…

Cell Behavior · Quantitative Biology 2022-10-12 Lee Susman , Maryam Kohram , Harsh Vashistha , Jeffrey T. Nechleba , Hanna Salman , Naama Brenner

Roots provide basic functions to plants such as water/nutrient uptake and anchoring in soil. The growth and development of root systems contribute to colonizing the surrounding soil and optimizing the access to resources. It is usually…

Soft Condensed Matter · Physics 2019-04-24 M. Fakih , J. -Y. Delenne , F. Radjai , T. Fourcaud

The growth dynamics of rigid biopolymers, consisting of $N$ parallel protofilaments, is investigated theoretically using simple approximate models. In our approach, the structure of a polymer's growing end and lateral interactions between…

Statistical Mechanics · Physics 2009-11-10 Evgeny B. Stukalin , Anatoly B. Kolomeisky

We present a model for cell growth, division and packing under soft constraints that arise from the deformability of the cells as well as of a membrane that encloses them. Our treatment falls within the framework of diffuse interface…

Cell Behavior · Quantitative Biology 2019-01-09 J. Jiang , K. Garikipati , S. Rudraraju

We investigate a continuum mechanical model for an adherent cell on two dimensional adhesive micropatterned substrates. The cell is modeled as an isotropic and homogeneous elastic material subject to uniform internal contractile stresses.…

Biological Physics · Physics 2013-12-30 Shiladitya Banerjee , Rastko Sknepnek , M. Cristina Marchetti

Using three-dimensional numerical simulations, we demonstrate the growth saturation of an unstable thin liquid film on micropatterned hydrophilic-hydrophobic substrates. We consider different transverse-striped micropatterns, characterized…

Soft Condensed Matter · Physics 2011-10-26 Rodrigo Ledesma-Aguilar , Aurora Hernandez-Machado , Ignacio Pagonabarraga

Biofilms are bacterial aggregates that grow on moist surfaces. Thin homogeneous biofilms naturally formed on the walls of conducts may serve as biosensors, providing information on the status of microsystems (MEMS) without disrupting them.…

Soft Condensed Matter · Physics 2024-01-17 Ana Carpio , Baldvin Einarsson , David R. Espeso

Hydra, a centimeter long cylindrical-shaped freshwater organism, has emerged as an interesting model system for studying morphogenesis in animals. Recently, fluorescent imaging of cytoskeletal actin filaments on the outer surface of hydra…

Soft Condensed Matter · Physics 2025-09-11 Sabyasachi Mukherjee , Anirban Sain

The mechanical response of cellular materials with spinodal topologies is numerically and experimentally investigated. Spinodal microstructures are generated by the numerical solution of the Cahn-Hilliard equation. Two different topologies…

Materials Science · Physics 2019-04-16 Meng-Ting Hsieh , Bianca Endo , Yunfei Zhang , Jens Bauer , Lorenzo Valdevit

Several mathematical models of tumor growth are now commonly used to explain medical observations and predict cancer evolution based on images. These models incorporate mechanical laws for tissue compression combined with rules for…

Analysis of PDEs · Mathematics 2014-01-16 Benoît Perthame , Min Tang , Nicolas Vauchelet

Cell migration plays a fundamental role in numerous physiological processes, including embryonic development, wound healing, and cancer metastasis. While cell-cell adhesion is known to regulate motion by shaping cell morphology and…

Biological Physics · Physics 2026-03-09 Anh Q. Nguyen , Pradip K. Bera , Jacob Notbohm , Dapeng Bi

Polymer association at liquid-liquid interfaces is a promising way to spontaneously obtain soft self-healing membranes. In the case of reversible bonding between two polymers, the macromolecules are mobile everywhere within the membrane and…

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