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Multiplexed imaging data are revolutionizing our understanding of the composition and organization of tissues and tumors. A critical aspect of such tissue profiling is quantifying the spatial relationship relationships among cells at…

Quantitative Methods · Quantitative Biology 2024-05-06 Ajit J. Nirmal , Peter K. Sorger

Spreadsheet software is the tool of choice for interactive ad-hoc data management, with adoption by billions of users. However, spreadsheets are not scalable, unlike database systems. On the other hand, database systems, while highly…

Databases · Computer Science 2017-10-09 Mangesh Bendre , Vipul Venkataraman , Xinyan Zhou , Kevin Chang , Aditya Parameswaran

Computer simulation has become one of the most important tools in scientific research in many disciplines. Benefiting from the dynamical trajectories regulated by versatile interatomic interactions, various material properties can be…

Materials Science · Physics 2024-11-28 Y. -C. Hu , J. Tian

This work introduces a new software package `Sesame' for the numerical computation of classical semiconductor equations. It supports 1 and 2-dimensional systems and provides tools to easily implement extended defects such as grain…

Applied Physics · Physics 2019-05-01 Benoit Gaury , Yubo Sun , Peter Bermel , Paul M. Haney

The increasing number and complexity of planetary exploration space missions require new tools to access, visualize and analyse data to improve their scientific return. ASI Science Data Center (ASDC) addresses this request with the web-tool…

Instrumentation and Methods for Astrophysics · Physics 2016-03-18 Angelo Zinzi , Maria Teresa Capria , Ernesto Palomba , Paolo Giommi , Lucio Angelo Antonelli

AsaPy is a custom-made Python library designed to simplify and optimize the analysis of aerospace simulation data. Instead of introducing new methodologies, it excels in combining various established techniques, creating a unified,…

Current approaches of enforcing FGAC in Database Management Systems (DBMS) do not scale in scenarios when the number of policies are in the order of thousands. This paper identifies such a use case in the context of emerging smart spaces…

Databases · Computer Science 2020-06-19 Primal Pappachan , Roberto Yus , Sharad Mehrotra , Johann-Christoph Freytag

We present a distributed system for storage, processing, three-dimensional visualisation and basic analysis of data from Earth-observing satellites. The database and the server have been designed for high performance and scalability,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-17 Marek Szuba , Parinaz Ameri , Udo Grabowski , Jörg Meyer , Achim Streit

Synthetic data are becoming a critical tool for building artificially intelligent systems. Simulators provide a way of generating data systematically and at scale. These data can then be used either exclusively, or in conjunction with real…

Artificial Intelligence · Computer Science 2023-04-07 Daniel McDuff , Theodore Curran , Achuta Kadambi

Simulation engines are widely adopted in robotics. However, they lack either full simulation control, ROS integration, realistic physics, or photorealism. Recently, synthetic data generation and realistic rendering has advanced tasks like…

Robotics · Computer Science 2023-05-29 Elia Bonetto , Chenghao Xu , Aamir Ahmad

In this paper, we argue that database systems be augmented with an automated data exploration service that methodically steers users through the data in a meaningful way. Such an automated system is crucial for deriving insights from…

Databases · Computer Science 2015-11-02 Kyriaki Dimitriadou , Olga Papaemmanouil , Yanlei Diao

The use of statistical software in academia and enterprises has been evolving over the last years. More often than not, students, professors, workers, and users, in general, have all had, at some point, exposure to statistical software.…

Applications · Statistics 2019-08-21 Rui Portocarrero Sarmento , Vera Costa

Computer simulations have become an important tool across the biomedical sciences and beyond. For many important problems several different models or hypotheses exist and choosing which one best describes reality or observed data is not…

Quantitative Methods · Quantitative Biology 2010-01-20 Tina Toni , Michael P. H. Stumpf

Computer simulations have become a very powerful tool for scientific research. Given the vast complexity that comes with many open scientific questions, a purely analytical or experimental approach is often not viable. For example,…

Neural and Evolutionary Computing · Computer Science 2016-07-12 Roman Bauer , Lukas Breitwieser , Alberto Di Meglio , Leonard Johard , Marcus Kaiser , Marco Manca , Manuel Mazzara , Max Talanov

We present MauveSim, the instrument simulator software for Mauve, the latest mission from Blue Skies Space dedicated to time-domain stellar astronomy. MauveSim functions as an end-to-end simulator, employing the most up-to-date knowledge of…

Instrumentation and Methods for Astrophysics · Physics 2025-09-24 Arianna Saba , Fabio Favata , Giorgio Savini , Giovanna Tinetti , Lawrence Bradley , Ian Stotesbury , Marcell Tessenyi

Over the past 40 years, database management systems (DBMSs) have evolved to provide a sophisticated variety of data management capabilities. At the same time, tools for managing queries over the data have remained relatively primitive. One…

Databases · Computer Science 2009-09-15 Nodira Khoussainova , Magda Balazinska , Wolfgang Gatterbauer , YongChul Kwon , Dan Suciu

Automated, data-driven quality management systems, which facilitate the transformation of data into useable information, are desired to enhance decision-making processes. Integration of accurate, reliable, and straightforward approaches…

Other Computer Science · Computer Science 2019-03-27 Wenying Ji

Analyzing the increasingly large volumes of data that are available today, possibly including the application of custom machine learning models, requires the utilization of distributed frameworks. This can result in serious productivity…

Databases · Computer Science 2019-08-20 Phanwadee Sinthong , Michael J. Carey

The CSVM format is derived from CSV format and allows the storage of tabular like data with a limited but extensible amount of metadata. This approach could help computer scientists because all information needed to uses subsequently the…

Computational Engineering, Finance, and Science · Computer Science 2012-09-19 Frédéric Rodriguez

Advances in technology and computing hardware are enabling scientists from all areas of science to produce massive amounts of data using large-scale simulations or observational facilities. In this era of data deluge, effective coordination…

Databases · Computer Science 2015-03-31 Spyros Blanas , Surendra Byna