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We study how confinement transforms the chaotic dynamics of bulk microtubule-based active nematics into regular spatiotemporal patterns. For weak confinements, multiple continuously nucleating and annihilating topological defects…

We use linear stability analysis and hybrid lattice Boltzmann simulations to study the dynamical behaviour of an active nematic confined in a channel made of viscoelastic material. We find that the quiescent, ordered active nematic is…

Soft Condensed Matter · Physics 2023-12-20 Francesco Mori , Saraswat Bhattacharyya , Julia M. Yeomans , Sumesh P. Thampi

Active processes drive and guide biological dynamics across scales -- from subcellular cytoskeletal remodelling, through tissue development in embryogenesis, to population-level bacterial colonies expansion. In each of these, biological…

Active nematic fluids confined in narrow channels generate spontaneous flows when the activity is sufficiently intense. Recently, it was shown that if the molecular anchoring at the channel walls is conflicting flows are initiated even in…

Soft Condensed Matter · Physics 2021-11-02 C. Rorai , F. Toschi , I. Pagonabarraga

Using agent-based simulations of self-propelled particles subject to short-range repulsion and nematic alignment we explore the dynamical phases of a dense active material confined to the surface of a sphere. We map the dynamical phase…

Soft Condensed Matter · Physics 2018-04-25 Silke Henkes , M. Cristina Marchetti , Rastko Sknepnek

Active nematic fluids exhibit complex dynamics in both bulk and in simple confining geometries. However, complex confining geometries could have substantial impact on active spontaneous flows. Using multiparticle collision dynamics…

Soft Condensed Matter · Physics 2025-01-16 Jaideep P. Vaidya , Tyler N. Shendruk , Sumesh P. Thampi

Confinement can be used to systematically tame turbulent dynamics occurring in active fluids. Although periodic channels are the simplest geometries to study confinement numerically, the corresponding experimental realizations require…

Soft Condensed Matter · Physics 2023-04-12 Chaitanya Joshi , Zahra Zarei , Michael M. Norton , Seth Fraden , Aparna Baskaran , Michael F. Hagan

Recent experiments on active materials, such as dense bacterial suspensions and microtubule-kinesin motor mixtures, show a promising potential for achieving self-sustained flows. However, to develop active microfluidics it is necessary to…

Soft Condensed Matter · Physics 2019-01-23 Santhan Chandragiri , Amin Doostmohammadi , Julia M Yeomans , Sumesh P Thampi

Topological defects in active liquid crystals can be confined by introducing gradients of activity. Here, we examine the dynamical behavior of two defects confined by a sharp gradient of activity that separates an active circular region and…

Soft Condensed Matter · Physics 2021-06-16 Ali Mozaffari , Rui Zhang , Noe Atzin , Juan J. de Pablo

We use continuum simulations to study the impact of anisotropic hydrodynamic friction on the emergent flows of active nematics. We show that, depending on whether the active particles align with or tumble in their collectively self-induced…

Soft Condensed Matter · Physics 2020-03-16 Kristian Thijssen , Luuk Metselaar , Julia M. Yeomans , Amin Doostmohammadi

The role of boundary layers in conventional liquid crystals is commonly subsumed in their anchoring on confining walls. In the classical view, anchoring enslaves the orientational field of the passive material under equilibrium conditions.…

We use active nematohydrodynamics to study the flow of an active fluid in a 3D microchannel, finding a transition between active turbulence and regimes where there is a net flow along the channel. We show that the net flow is only possible…

Soft Condensed Matter · Physics 2020-10-07 Santhan Chandragiri , Amin Doostmohammadi , Julia M. Yeomans , Sumesh P. Thampi

Active fluids display spontaneous turbulent-like flows known as active turbulence. Recent work revealed that these flows have universal features, independent of the material properties and of the presence of topological defects. However,…

Soft Condensed Matter · Physics 2026-03-19 Ido Lavi , Ricard Alert , Jean-François Joanny , Jaume Casademunt

We study the dynamics of a tunable 2D active nematic liquid crystal composed of microtubules and kinesin motors confined to an oil-water interface. Kinesin motors continuously inject mechanical energy into the system through ATP hydrolysis,…

Soft Condensed Matter · Physics 2019-09-10 Linnea M Lemma , Stephen J Decamp , Zhihong You , Luca Giomi , Zvonimir Dogic

We numerically model a two-dimensional active nematic confined by a periodic array of fixed obstacles. Even in the passive nematic, the appearance of topological defects is unavoidable due to planar anchoring by the obstacle surfaces. We…

Soft Condensed Matter · Physics 2024-01-25 Cody D. Schimming , C. J. O. Reichhardt , C. Reichhardt

We investigate similarities in the micro-structural dynamics between externally driven and actively driven nematics. Walls, lines of strong deformations in the director field, and topological defects are characteristic features of an active…

Soft Condensed Matter · Physics 2015-04-28 Sumesh P. Thampi , Ramin Golestanian , Julia M. Yeomans

We study the dynamics of active nematic films on a substrate driven by active flows with or without the incompressible constraint.Through simulations and theoretical analysis, we show that arch patterns are stable in the compressible case,…

Soft Condensed Matter · Physics 2022-11-30 Supavit Pokawanvit , Zhitao Chen , Zhihong You , Luiza Angheluta , M. Cristina Marchetti , Mark J. Bowick

Active matter embraces systems that self-organize at different length and time scales, often exhibiting turbulent flows. Here, we use a quasi-two-dimensional nematically ordered layer of a protein-based active gel to experimentally…

Soft Condensed Matter · Physics 2017-11-01 Pau Guillamat , Jordi Ignés-Mullol , Francesc Sagués

Using a minimal continuum model, we investigate the interplay between circular confinement and substrate friction in active nematics. Upon increasing the friction from low to high, we observe a dynamical phase transition from a circulating…

Soft Condensed Matter · Physics 2023-10-27 Cody D. Schimming , C. J. O. Reichhardt , C. Reichhardt

Engineering synthetic materials that mimic the remarkable complexity of living organisms is a fundamental challenge in science and technology. We study the spatiotemporal patterns that emerge when an active nematicfilm of microtubules and…

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