Related papers: Faster Biclique Mining in Near-Bipartite Graphs
The \textsc{Bipartite Contraction} problem is to decide, given a graph $G$ and a parameter $k$, whether we can can obtain a bipartite graph from $G$ by at most $k$ edge contractions. The fixed-parameter tractability of the problem was shown…
We prove new results for approximating Graphic TSP. Specifically, we provide a polynomial-time \frac{9}{7}-approximation algorithm for cubic bipartite graphs and a (\frac{9}{7}+\frac{1}{21(k-2)})-approximation algorithm for k-regular…
Quasi-median graphs are a tool commonly used by evolutionary biologists to visualise the evolution of molecular sequences. As with any graph, a quasi-median graph can contain cut vertices, that is, vertices whose removal disconnect the…
We describe a new sampling-based method to determine cuts in an undirected graph. For a graph (V, E), its cycle space is the family of all subsets of E that have even degree at each vertex. We prove that with high probability, sampling the…
We propose efficient algorithms for enumerating maximal common subsequences (MCSs) of two strings. Efficiency of the algorithms are estimated by the preprocessing-time, space, and delay-time complexities. One algorithm prepares a…
The goal of the thesis is to leverage fast graph algorithms and modern algorithmic techniques for problems in model checking and synthesis on graphs, MDPs, and game graphs. The results include symbolic algorithms, a well-known class of…
We study bipartite community detection in networks, or more generally the network biclustering problem. We present a fast two-stage procedure based on spectral initialization followed by the application of a pseudo-likelihood classifier…
In this paper, we consider the problem of finding a cycle of length $2k$ (a $C_{2k}$) in an undirected graph $G$ with $n$ nodes and $m$ edges for constant $k\ge2$. A classic result by Bondy and Simonovits [J.Comb.Th.'74] implies that if $m…
Let H be a connected bipartite graph with n nodes and m edges. We give an O(nm) time algorithm to decide whether H is an interval bigraph. The best known algorithm has time complexity O(nm^6(m + n) \log n) and it was developed in 1997 [18].…
Finding dense subgraphs is a fundamental algorithmic tool in data mining, community detection, and clustering. In this problem, one aims to find an induced subgraph whose edge-to-vertex ratio is maximized. We study the directed case of this…
Given a graph $G = (V, E)$ and an integer $k$, the Minimum Membership Dominating Set problem asks to compute a set $S \subseteq V$ such that for each $v \in V$, $1 \leq |N[v] \cap S| \leq k$. The problem is known to be NP-complete even on…
The Maximum Common Subgraph (MCS) problem plays a key role in many applications, including cheminformatics, bioinformatics, and pattern recognition, where it is used to identify the largest shared substructure between two graphs. Although…
As the most typical graph clustering method, spectral clustering is popular and attractive due to the remarkable performance, easy implementation, and strong adaptability. Classical spectral clustering measures the edge weights of graph…
We improve the running time of the general algorithmic technique known as Baker's approach (1994) on H-minor-free graphs from O(n^{f(|H|)}) to O(f(|H|) n^{O(1)}). The numerous applications include e.g. a 2-approximation for coloring and…
This paper concerns the efficient implementation of a method for optimal binary labeling of graph vertices, originally proposed by Malmberg and Ciesielski (2020). This method finds, in quadratic time with respect to graph size, a labeling…
We study the widely used hierarchical agglomerative clustering (HAC) algorithm on edge-weighted graphs. We define an algorithmic framework for hierarchical agglomerative graph clustering that provides the first efficient $\tilde{O}(m)$ time…
Building on existing algorithms and results, we offer new insights and algorithms for various problems related to detecting maximal and maximum bicliques. Most of these results focus on graphs with small maximum degree, providing improved…
Recently [Bhattacharya et al., STOC 2015] provide the first non-trivial algorithm for the densest subgraph problem in the streaming model with additions and deletions to its edges, i.e., for dynamic graph streams. They present a…
Bipartite graphs are commonly used to model relationships between two distinct entities in real-world applications, such as user-product interactions, user-movie ratings and collaborations between authors and publications. A butterfly (a…
Given a graph $G=(V, E)$ and and a proper labeling $f$ from $V$ to $\{1, ..., n\}$, we define $B(f)$ as the maximum absolute difference between $f(u)$ and $f(v)$ where $(u,v)\in E$. The bandwidth of $G$ is the minimum $B(f)$ for all $f$.…