Related papers: Segmentation of Roots in Soil with U-Net
Non-invasive detection of cardiovascular disorders from radiology scans requires quantitative image analysis of the heart and its substructures. There are well-established measurements that radiologists use for diseases assessment such as…
Crops for food, feed, fiber, and fuel are key natural resources for our society. Monitoring plants and measuring their traits is an important task in agriculture often referred to as plant phenotyping. Traditionally, this task is done…
Early detection of melanoma is difficult for the human eye but a crucial step towards reducing its death rate. Computerized detection of these melanoma and other skin lesions is necessary. The central research question in this paper is "How…
X-ray Computed Tomography (XCT) techniques have evolved to a point that high-resolution data can be acquired so fast that classic segmentation methods are prohibitively cumbersome, demanding automated data pipelines capable of dealing with…
3D mapping of tree roots is a popular ground-penetrating radar (GPR) application. In real field tests, the recognition of tree roots suffers due to noisey reflection patterns from subsurface targets that are not of interest, such as rocks,…
Live cell microscopy sequences exhibit complex spatial structures and complicated temporal behaviour, making their analysis a challenging task. Considering cell segmentation problem, which plays a significant role in the analysis, the…
Bioprinting is a rapidly advancing field that offers a transformative approach to fabricating tissue and organ models through the precise deposition of cell-laden bioinks. Ensuring the fidelity and consistency of printed structures in…
Image segmentation is a primary task in many medical applications. Recently, many deep networks derived from U-Net have been extensively used in various medical image segmentation tasks. However, in most of the cases, networks similar to…
Early detection and segmentation of skin lesions is crucial for timely diagnosis and treatment, necessary to improve the survival rate of patients. However, manual delineation is time consuming and subject to intra- and inter-observer…
Optic disc and cup segmentation helps in the diagnosis of glaucoma, myocardial infarction, and diabetic retinopathy. Most deep learning methods developed to perform segmentation tasks are built on top of a U-Net-based model architecture.…
Fine-tuning a network which has been trained on a large dataset is an alternative to full training in order to overcome the problem of scarce and expensive data in medical applications. While the shallow layers of the network are usually…
Automatic medical image segmentation is a crucial topic in the medical domain and successively a critical counterpart in the computer-aided diagnosis paradigm. U-Net is the most widespread image segmentation architecture due to its…
For semantic segmentation of remote sensing images (RSI), trade-off between representation power and location accuracy is quite important. How to get the trade-off effectively is an open question,where current approaches of utilizing very…
Practical automated detection and diagnosis of plant disease from wide-angle images (i.e. in-field images containing multiple leaves using a fixed-position camera) is a very important application for large-scale farm management, in view of…
Segmentation of the Left ventricle (LV) is a crucial step for quantitative measurements such as area, volume, and ejection fraction. However, the automatic LV segmentation in 2D echocardiographic images is a challenging task due to…
Over the last few years, the number of precision farming projects has increased specifically in harvesting robots and many of which have made continued progress from identifying crops to grasping the desired fruit or vegetable. One of the…
We present W-Net, a novel Convolution Neural Network (CNN) framework that employs raw ultrasound waveforms from each A-scan, typically referred to as ultrasound Radio Frequency (RF) data, in addition to the gray ultrasound image to…
Segmentation of organs of interest in 3D medical images is necessary for accurate diagnosis and longitudinal studies. Though recent advances using deep learning have shown success for many segmentation tasks, large datasets are required for…
Recently, joint registration and segmentation has been formulated in a deep learning setting, by the definition of joint loss functions. In this work, we investigate joining these tasks at the architectural level. We propose a registration…
Organ at risk (OAR) segmentation in computed tomography (CT) imagery is a difficult task for automated segmentation methods and can be crucial for downstream radiation treatment planning. U-net has become a de-facto standard for medical…