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Real-time nonequilibrium Green functions (NEGF) have been very successful to simulate the dynamics of correlated many-particle systems far from equilibrium. However, NEGF simulations are computationally expensive since the effort scales…

Strongly Correlated Electrons · Physics 2023-12-27 Karsten Balzer , Niclas Schlünzen , Hannes Ohldag , Jan-Philip Joost , Michael Bonitz

The ionization state of the gas in the dynamic solar chromosphere can depart strongly from the instantaneous statistical equilibrium commonly assumed in numerical modeling. We improve on earlier simulations of the solar atmosphere that only…

Solar and Stellar Astrophysics · Physics 2016-02-03 Thomas Peter Golding , Jorrit Leenaarts , Mats Carlsson

The existence and structure of steady gaseous detonation propagating in a packed bed of solid inert particles are analyzed in the one-dimensional approximation by taking into consideration frictional and heat losses between the gas and the…

Fluid Dynamics · Physics 2013-12-10 Roman Semenko , Luiz Faria , Aslan Kasimov , Boris Ermolaev

A longstanding computational challenge is the accurate simulation of many-body particle systems. Especially for deriving key characteristics of high-impact but complex systems such as battery materials and high entropy alloys (HEA). While…

Quantum Physics · Physics 2025-11-20 Koen Mesman , Yinglu Tang , Matthias Moller , Boyang Chen , Sebastian Feld

Simulating the dynamics of ions near polarizable nanoparticles (NPs) using coarse-grained models is extremely challenging due to the need to solve the Poisson equation at every simulation timestep. Recently, a molecular dynamics (MD) method…

Computational Physics · Physics 2019-11-01 JCS Kadupitiya , Geoffrey C. Fox , Vikram Jadhao

Many physical and chemical processes in the condensed phase environment exhibit non-Markovian quantum dynamics. As such simulations are challenging on classical computers, we developed a variational quantum algorithm that is capable of…

Quantum Physics · Physics 2024-03-11 Peter L. Walters , Joachim Tsakanikas , Fei Wang

We present an efficient computational approach to perform real-space electronic structure calculations using an adaptive higher-order finite-element discretization of Kohn-Sham density-functional theory (DFT). To this end, we develop an…

Computational Physics · Physics 2015-06-05 Phani Motamarri , Michael R Nowak , Kenneth Leiter , Jaroslaw Knap , Vikram Gavini

We discuss recent improvements in the calculation of the radiative cooling in both collisionally and photo ionized plasmas. We are extending the spectral simulation code Cloudy so that as much as possible of the underlying atomic data is…

High Energy Astrophysical Phenomena · Physics 2015-06-12 M. L. Lykins , G. J. Ferland , Ryan L. Porter , Peter A. M. van Hoof , R. J. R. Williams , Orly Gnat

In this paper, we analyze a virtual element method (VEM) for solving a non-selfadjoint fourth-order eigenvalue problem derived from the transmission eigenvalue problem. We write a variational formulation and propose a $C^1$-conforming…

Numerical Analysis · Mathematics 2018-03-12 David Mora , Iván Velásquez

This paper describes a numerical scheme for multi-fluid hydrodynamics in the limit of small mass densities of the charged particles. The inertia of the charged particles can then be neglected, which makes it possible to write an evolution…

Astrophysics · Physics 2009-11-10 S. A. E. G. Falle

Based on the traditional VAE, a novel neural network model is presented, with the latest molecular representation, SELFIES, to improve the effect of generating new molecules. In this model, multi-layer convolutional network and Fisher…

Biomolecules · Quantitative Biology 2023-05-03 Li Kai , Li Ning , Zhang Wei , Gao Ming

We explore a method to extract energy eigenstates, called Athens Model Independent Analysis Scheme (AMIAS), which is an alternative to solving standard Generalized Eigenvalue Problems (GEVP). The method is based on statistically sampling…

High Energy Physics - Lattice · Physics 2017-01-27 Jacob Finkenrath , Constantia Alexandrou , Joshua Berlin , Mattia Dalla Brida , Theodoros Leontiou , Marc Wagner

A local and parallel algorithm based on the multilevel discretization is proposed in this paper to solve the eigenvalue problem by the finite element method. With this new scheme, solving the eigenvalue problem in the finest grid is…

Numerical Analysis · Mathematics 2014-01-21 Yu Li , Xiaole Han , Hehu Xie , Chunguang You

The Jarzynski equality (JE) provides a nonequilibrium method to measure and calculate the free energy difference (FED). Note that if two systems share the same Hamiltonian at two equilibrium states, respectively, they share the same FED…

Statistical Mechanics · Physics 2020-07-16 Liyun Zhu , Jiao Wang

In this paper, a novel multigrid method based on Newton iteration is proposed to solve nonlinear eigenvalue problems. Instead of handling the eigenvalue $\lambda$ and eigenfunction $u$ separately, we treat the eigenpair $(\lambda, u)$ as…

Numerical Analysis · Mathematics 2024-04-30 Fei Xu , Manting Xie , Meiling Yue

Phase equilibrium calculation, also known as flash calculation, has been extensively applied in petroleum engineering, not only as a standalone application for separation process but also an integral component of compositional reservoir…

Computational Physics · Physics 2019-01-29 Yiteng Li , Tao Zhang , Shuyu Sun

The energy levels of the first few low-lying states of helium and lithium atoms in intense magnetic fields up to $\approx 10^8-10^9$~T are calculated in this study. A pseudospectral method is employed for the computational procedure. The…

Quantum Physics · Physics 2014-06-11 Anand Thirumalai , Jeremy S. Heyl

This paper is concerned with mixed finite element method (FEM) for solving the two-dimensional, nonlinear fourth-order active fluid equations. By introducing an auxiliary variable $w=-\Delta u$, the original fourth problem is transformed…

Numerical Analysis · Mathematics 2025-07-30 Nan Zheng , Xu Guo , Wenlong Pei , Wenju Zhao

In this report, we propose a divergence-free preserving mixed finite element method (FEM) for the system of nonlinear fourth-order thermally driven active fluid equations. By introducing two auxiliary variables, we lower the complexity of…

Numerical Analysis · Mathematics 2025-09-24 Nan Zheng , Qingguang Guan , Wenlong Pei , Wenju Zhao

Nonequilibrium (time-dependent) cooling rates and ionization state calculations are presented for low-density gas enriched with heavy elements (metals) and photoionized by external ultraviolet/X-ray radiation. We consider a wide range of…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-19 Evgenii O. Vasiliev