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Many natural systems are organized as networks, in which the nodes (be they cells, individuals or populations) interact in a time-dependent fashion. The dynamic behavior of these networks depends on how these nodes are connected, which can…

Neurons and Cognition · Quantitative Biology 2015-06-22 Anca Radulescu , Sergio Verduzco-Flores

Scale-free (SF) networks and small world networks have been found to occur in very diverse contexts. It is this striking universality which makes one look for widely applicable mechanisms which lead to the formation of such networks. In…

Disordered Systems and Neural Networks · Physics 2007-05-23 Markus Brede , John Finnigan

The collective dynamics of interacting dynamical units on a network crucially depends on the properties of the network structure. Rather than considering large but finite graphs to capture the network, one often resorts to graph limits and…

Dynamical Systems · Mathematics 2024-08-06 Christian Bick , Davide Sclosa

Anatomic connections between brain areas affect information flow between neuronal circuits and the synchronization of neuronal activity. However, such structural connectivity does not coincide with effective connectivity, related to the…

Neurons and Cognition · Quantitative Biology 2015-06-03 Demian Battaglia , Annette Witt , Fred Wolf , Theo Geisel

Link prediction is one of the central problems in graph mining. However, recent studies highlight the importance of higher-order network analysis, where complex structures called motifs are the first-class citizens. We first show that…

We consider a deep structured linear network under sparsity constraints. We study sharp conditions guaranteeing the stability of the optimal parameters defining the network. More precisely, we provide sharp conditions on the network…

Optimization and Control · Mathematics 2023-02-03 Francois Malgouyres

Many works show that node-level predictions of Graph Neural Networks (GNNs) are unrobust to small, often termed adversarial, changes to the graph structure. However, because manual inspection of a graph is difficult, it is unclear if the…

Machine Learning · Computer Science 2023-05-03 Lukas Gosch , Daniel Sturm , Simon Geisler , Stephan Günnemann

Over the last two decades, network theory has shown to be a fruitful paradigm in understanding the organization and functioning of real-world complex systems. One technique helpful to this endeavor is identifying functionally influential…

Physics and Society · Physics 2022-01-24 Francesco Picciolo , Franco Ruzzenenti , Petter Holme , Rossana Mastrandrea

Network motifs are patterns of over-represented node interactions in a network which have been previously used as building blocks to understand various aspects of the social networks. In this paper, we use motif patterns to characterize the…

Social and Information Networks · Computer Science 2019-03-05 Soumajyoti Sarkar , Ruocheng Guo , Paulo Shakarian

A deluge of new data on social, technological and biological networked systems suggests that a large number of interactions among system units are not limited to pairs, but rather involve a higher number of nodes. To properly encode such…

Physics and Society · Physics 2023-11-08 Quintino Francesco Lotito , Federico Musciotto , Alberto Montresor , Federico Battiston

A class of random graphs is introduced and studied. The graphs are constructed in an algorithmic way from five motifs which were found in [Milo R., Shen-Orr S., Itzkovitz S., Kashtan N., Chklovskii D., Alon U., Science, 2002, 298, 824-827].…

Mathematical Physics · Physics 2011-06-23 M. Kotorowicz , Yu. Kozitsky

The theory of complex networks and of disordered systems is used to study the stability and dynamical properties of a simple model of material flow networks defined on random graphs. In particular we address instabilities that are…

Disordered Systems and Neural Networks · Physics 2009-11-13 Kartik Anand , Tobias Galla

The synaptic connectivity of cortical networks features an overrepresentation of certain wiring motifs compared to simple random-network models. This structure is shaped, in part, by synaptic plasticity that promotes or suppresses…

Neurons and Cognition · Quantitative Biology 2014-12-23 Gabriel Koch Ocker , Ashok Litwin-Kumar , Brent Doiron

Deep networks realize complex mappings that are often understood by their locally linear behavior at or around points of interest. For example, we use the derivative of the mapping with respect to its inputs for sensitivity analysis, or to…

Machine Learning · Computer Science 2019-07-09 Guang-He Lee , David Alvarez-Melis , Tommi S. Jaakkola

We study the dynamics of the structure of a formal neural network wherein the strengths of the synapses are governed by spike-timing-dependent plasticity (STDP). For properly chosen input signals, there exists a steady state with a residual…

Neurons and Cognition · Quantitative Biology 2015-05-18 Quansheng Ren , Kiran M. Kolwankar , Areejit Samal , Jürgen Jost

Seeking effective neural networks is a critical and practical field in deep learning. Besides designing the depth, type of convolution, normalization, and nonlinearities, the topological connectivity of neural networks is also important.…

Computer Vision and Pattern Recognition · Computer Science 2020-08-20 Kun Yuan , Quanquan Li , Jing Shao , Junjie Yan

Using particle-scale models to accurately describe property enhancements and phase transitions in macroscopic behavior is a major engineering challenge in composite materials science. To address some of these challenges, we use the graph…

Disordered Systems and Neural Networks · Physics 2018-09-12 Samuel Heroy , Dane Taylor , Feng Shi , M. Gregory Forest , Peter J. Mucha

Dynamics in biological networks are in general robust against several perturbations. We investigate a coupled map network as a model motivated by gene regulatory networks and design systems which are robust against phenotypic perturbations…

Molecular Networks · Quantitative Biology 2015-03-20 Nen Saito , Macoto Kikuchi

We investigate a special case of hereditary property that we refer to as {\em robustness}. A property is {\em robust} in a given graph if it is inherited by all connected spanning subgraphs of this graph. We motivate this definition in…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-10 Arnaud Casteigts , Swan Dubois , Franck Petit , John Michael Robson

With the growing amount of available temporal real-world network data, an important question is how to efficiently study these data. One can simply model a temporal network as either a single aggregate static network, or as a series of…

Social and Information Networks · Computer Science 2014-12-15 Yuriy Hulovatyy , Huili Chen , Tijana Milenkovic