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The process of collecting blood from donors and making it available for transfusion requires a complex series of operations involving multiple actors and resources at each step. Ensuring hospitals receive adequate and safe blood for…

Human blood flow is a multi-scale problem: in first approximation, blood is a dense suspension of plasma and deformable red cells. Physiological vessel diameters range from about one to thousands of cell radii. Current computational models…

Soft Condensed Matter · Physics 2015-03-17 Florian Janoschek , Federico Toschi , Jens Harting

Dynamic mode decomposition (DMD) is a powerful and increasingly popular tool for performing spectral analysis of fluid flows. However, it requires data that satisfy the Nyquist-Shannon sampling criterion. In many fluid flow experiments,…

Fluid Dynamics · Physics 2014-09-17 Jonathan H. Tu , Clarence W. Rowley , J. Nathan Kutz , Jessica K. Shang

Recurrent neural networks have a strong inductive bias towards learning temporally compressed representations, as the entire history of a sequence is represented by a single vector. By contrast, Transformers have little inductive bias…

Machine Learning · Computer Science 2022-10-26 Aniket Didolkar , Kshitij Gupta , Anirudh Goyal , Nitesh B. Gundavarapu , Alex Lamb , Nan Rosemary Ke , Yoshua Bengio

An often overlooked problem in medical image segmentation research is the effective selection of training subsets to annotate from a complete set of unlabelled data. Many studies select their training sets at random, which may lead to…

Computer Vision and Pattern Recognition · Computer Science 2025-03-24 Stephen Lloyd-Brown , Susan Francis , Caroline Hoad , Penny Gowland , Karen Mullinger , Andrew French , Xin Chen

Sampling from unnormalized target distributions is a fundamental yet challenging task in machine learning and statistics. Existing sampling algorithms typically require many iterative steps to produce high-quality samples, leading to high…

Machine Learning · Computer Science 2025-02-17 Pascal Jutras-Dubé , Patrick Pynadath , Ruqi Zhang

Understanding the physics of blood is challenging due to its nature as a suspension of soft particles and the fact that typical problems involve different scales. This is valid also for numerical investigations. In fact, many computational…

Soft Condensed Matter · Physics 2011-09-16 Florian Janoschek , Federico Toschi , Jens Harting

Consistent sampling is a technique for specifying, in small space, a subset $S$ of a potentially large universe $U$ such that the elements in $S$ satisfy a suitably chosen sampling condition. Given a subset $\mathcal{I}\subseteq U$ it…

Data Structures and Algorithms · Computer Science 2014-04-21 Konstantin Kutzkov , Rasmus Pagh

We describe a very simple method for `consistent sampling' that allows for sampling with replacement. The method extends previous approaches to consistent sampling, which assign a pseudorandom real number to each element, and sample those…

Data Structures and Algorithms · Computer Science 2018-08-31 Ronald L. Rivest

Optical time-reversal techniques are being actively developed to focus light through or inside opaque scattering media. When applied to biological tissue, these techniques promise to revolutionize biophotonics by enabling deep-tissue…

Biological Physics · Physics 2016-11-07 Yuecheng Shen , Yan Liu , Cheng Ma , Lihong V. Wang

Incoherent k-space undersampling and deep learning-based reconstruction methods have shown great success in accelerating MRI. However, the performance of most previous methods will degrade dramatically under high acceleration factors, e.g.,…

Image and Video Processing · Electrical Eng. & Systems 2026-01-21 Jin Liu , Qing Lin , Zhuang Xiong , Shanshan Shan , Chunyi Liu , Min Li , Feng Liu , G. Bruce Pike , Hongfu Sun , Yang Gao

Microplastics (MPs) are ubiquitous in all ecosystems, affecting wildlife and, ultimately, human health. The complexity of natural samples plus the unspecificity of their treatments to isolate polymers renders the characterization of…

Instrumentation and Detectors · Physics 2025-04-01 Adrian Lopez-Rosales , Jose Andrade , Borja Ferreiro , Soledad Muniategui

Modern high-throughput single-cell immune profiling technologies, such as flow and mass cytometry and single-cell RNA sequencing can readily measure the expression of a large number of protein or gene features across the millions of cells…

Quantitative Methods · Quantitative Biology 2022-07-05 Vishal Athreya Baskaran , Jolene Ranek , Siyuan Shan , Natalie Stanley , Junier B. Oliva

With the emergence of graph databases, the task of frequent subgraph discovery has been extensively addressed. Although the proposed approaches in the literature have made this task feasible, the number of discovered frequent subgraphs is…

Databases · Computer Science 2013-08-16 Wajdi Dhifli , Mohamed Moussaoui , Rabie Saidi , Engelbert Mephu Nguifo

Parametric reduced-order modelling often serves as a surrogate method for hemodynamics simulations to improve the computational efficiency in many-query scenarios or to perform real-time simulations. However, the snapshots of the method…

Computational Engineering, Finance, and Science · Computer Science 2023-10-24 Dongwei Ye , Valeria Krzhizhanovskaya , Alfons G. Hoekstra

An important step in diagnostics is the isolation of specific cells and microorganisms of interest from blood. Since such bioparticles are often present at very low concentrations, throughput needs to be as high as possible. In addition, to…

Soft Condensed Matter · Physics 2019-07-31 Stefan H. Holm , Zunmin Zhang , Jason P. Beech , Gerhard Gompper , Dmitry A. Fedosov , Jonas O. Tegenfeldt

Early stopping is a well known approach to reduce the time complexity for performing training and model selection of large scale learning machines. On the other hand, memory/space (rather than time) complexity is the main constraint in many…

Machine Learning · Statistics 2018-02-02 Tomas Angles , Raffaello Camoriano , Alessandro Rudi , Lorenzo Rosasco

As an alternative to the traditional sampling theory, compressed sensing allows acquiring much smaller amount of data, still estimating the spectra of frequency-sparse signals accurately. However, compressed sensing usually requires random…

Information Theory · Computer Science 2016-07-22 Shan Huang , Hong Sun , Haijian Zhang , Lei Yu

We present a new method for making diffusion models faster to sample. The method distills many-step diffusion models into few-step models by matching conditional expectations of the clean data given noisy data along the sampling trajectory.…

Machine Learning · Computer Science 2024-06-07 Tim Salimans , Thomas Mensink , Jonathan Heek , Emiel Hoogeboom

From a high volume stream of weighted items, we want to maintain a generic sample of a certain limited size $k$ that we can later use to estimate the total weight of arbitrary subsets. This is the classic context of on-line reservoir…

Data Structures and Algorithms · Computer Science 2010-11-16 Edith Cohen , Nick Duffield , Haim Kaplan , Carsten Lund , Mikkel Thorup
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