Related papers: A framework for information extraction from tables…
Automating information extraction from form-like documents at scale is a pressing need due to its potential impact on automating business workflows across many industries like financial services, insurance, and healthcare. The key challenge…
Using different sources of information to support automated extracting of relations between biomedical concepts contributes to the development of our understanding of biological systems. The primary comprehensive source of these relations…
Scientific literature is one of the most significant resources for sharing knowledge. Researchers turn to scientific literature as a first step in designing an experiment. Given the extensive and growing volume of literature, the common…
Tables in Web documents are pervasive and can be directly used to answer many of the queries searched on the Web, motivating their integration in question answering. Very often information presented in tables is succinct and hard to…
Tables are recognized for their high information density and widespread usage, serving as essential sources of information. Seeking information from tables (TIS) is a crucial capability for Large Language Models (LLMs), serving as the…
Information extraction from chemistry literature is vital for constructing up-to-date reaction databases for data-driven chemistry. Complete extraction requires combining information across text, tables, and figures, whereas prior work has…
Process mining focuses on the analysis of recorded event data in order to gain insights about the true execution of business processes. While foundational process mining techniques treat such data as sequences of abstract events, more…
This paper introduces a system that integrates large language models (LLMs) into the clinical trial retrieval process, enhancing the effectiveness of matching patients with eligible trials while maintaining information privacy and allowing…
A procedure for bibliographic author metadata extraction from scholarly texts is presented. The author segments are identified based on capitalization and line break patterns. Two main author layout templates, which can retrieve from a…
The global output of academic publications exceeds 5 million articles per year, making it difficult for humans to keep up with even a tiny fraction of scientific output. We need methods to navigate and interpret the artifacts -- texts,…
In this article, we present a methodology which takes as input a collection of retracted articles, gathers the entities citing them, characterizes such entities according to multiple dimensions (disciplines, year of publication, sentiment,…
Objective: Automatic text summarization tools can help users in the biomedical domain to access information efficiently from a large volume of scientific literature and other sources of text documents. In this paper, we propose a…
One essential task in information extraction from the medical corpus is drug name recognition. Compared with text sources come from other domains, the medical text is special and has unique characteristics. In addition, the medical text…
This paper presents AppTechMiner, a rule-based information extraction framework that automatically constructs a knowledge base of all application areas and problem solving techniques. Techniques include tools, methods, datasets or…
Biomedical information extraction (BioIE) is important to many applications, including clinical decision support, integrative biology, and pharmacovigilance, and therefore it has been an active research. Unlike existing reviews covering a…
Web Data Extraction is an important problem that has been studied by means of different scientific tools and in a broad range of applications. Many approaches to extracting data from the Web have been designed to solve specific problems and…
In this paper, we investigate how semantic relations between concepts extracted from medical documents can be employed to improve the retrieval of medical literature. Semantic relations explicitly represent relatedness between concepts and…
We study a new problem setting of information extraction (IE), referred to as text-to-table. In text-to-table, given a text, one creates a table or several tables expressing the main content of the text, while the model is learned from…
Many of the most commonly explored natural language processing (NLP) information extraction tasks can be thought of as evaluations of declarative knowledge, or fact-based information extraction. Procedural knowledge extraction, i.e.,…
Authors of biomedical publications often use gel images to report experimental results such as protein-protein interactions or protein expressions under different conditions. Gel images offer a way to concisely communicate such findings,…