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Background: Tree reconciliation problems have long been studied in phylogenetics. A particular variant of the reconciliation problem for a gene tree T and a species tree S assumes that for each interior vertex x of T it is known whether x…

Discrete Mathematics · Computer Science 2017-05-12 Maribel Hernandez-Rosales , Marc Hellmuth , Nicolas Wieseke , Katharina T. Huber , Vincent Moulton , Peter F. Stadler

The (dual) Cauchy identity has an easy algebraic proof utilising a commutation relation between the up and (dual) down operators. By using Fomin's growth diagrams, a bijective proof of the commutation relation can be "bijectivised" to…

Combinatorics · Mathematics 2024-04-08 Florian Schreier-Aigner

We prove uniform consistency of Random Survival Forests (RSF), a newly introduced forest ensemble learner for analysis of right-censored survival data. Consistency is proven under general splitting rules, bootstrapping, and random selection…

Statistics Theory · Mathematics 2008-11-19 Hemant Ishwaran , Udaya B. Kogalur

For a model of molecular evolution to be useful for phylogenetic inference, the topology of evolutionary trees must be identifiable. That is, from a joint distribution the model predicts, it must be possible to recover the tree parameter.…

Populations and Evolution · Quantitative Biology 2011-11-09 Elizabeth S. Allman , John A. Rhodes

We prove two partition identities which are dual to the Rogers-Ramanujan identities. These identities are inspired by (and proved using) a correspondence between three kinds of objects: a new type of partitions (neighborly partitions),…

Combinatorics · Mathematics 2022-01-10 Zahraa Mohsen , Hussein Mourtada

In this paper we give a sufficient and necessary condition for two rooted trees with the same plucking polynomial. Furthermore, we give a criteria for a sequence of non-negative integers to be realized as a rooted tree.

Geometric Topology · Mathematics 2019-07-25 Zhiyun Cheng , Sujoy Mukherjee , Jozef Przytycki , Xiao Wang , Seung Yeop Yang

For a labelled tree on the vertex set $[n]:=\{1,2,..., n\}$, define the direction of each edge $ij$ to be $i\to j$ if $i<j$. The indegree sequence of $T$ can be considered as a partition $\lambda \vdash n-1$. The enumeration of trees with a…

Combinatorics · Mathematics 2009-04-02 Rosena R. X. Du , Jingbin Yin

Hash codes are a very efficient data representation needed to be able to cope with the ever growing amounts of data. We introduce a random forest semantic hashing scheme with information-theoretic code aggregation, showing for the first…

Computer Vision and Pattern Recognition · Computer Science 2015-04-20 Qiang Qiu , Guillermo Sapiro , Alex Bronstein

We present a decomposition of the generalized binomial coefficients associated with Jack polynomials into two factors: a stem, which is described explicitly in terms of hooks of the indexing partitions, and a leaf, which inherits various…

Combinatorics · Mathematics 2018-07-30 Yusra Naqvi , Siddhartha Sahi

We prove that in both the free and the wired uniform spanning forest (FUSF and WUSF) of any unimodular random rooted network (in particular, of any Cayley graph), it is impossible to distinguish the connected components of the forest from…

Probability · Mathematics 2018-05-01 Tom Hutchcroft , Asaf Nachmias

We formulate several polynomial identities. One side of these identities has a nice simple form. Whereas the other has a form of a polynomial whose coefficients contain binomial coefficients double factorials or (and) rising factorials. The…

Probability · Mathematics 2023-02-09 Paweł J. Szabłowski

We provide combinatorial tools inspired by work of Warnaar to give combinatorial interpretations of the sum sides of the Andrews-Gordon and Bressoud identities. More precisely, we give an explicit weight- and length-preserving bijection…

Combinatorics · Mathematics 2024-03-11 Jehanne Dousse , Frédéric Jouhet , Isaac Konan

In this work, we give combinatorial proofs for generating functions of two problems, i.e., flushed partitions and concave compositions of even length. We also give combinatorial interpretation of one problem posed by Sylvester involving…

Combinatorics · Mathematics 2011-12-13 Xiaochuan Liu

We prove some combinatorial identities using the Polya urn and the closely related Hoppe urn.

Probability · Mathematics 2013-10-02 S. N. Ethier , Fred M. Hoppe

Meadows are a sort of commutative rings with a multiplicative identity element and a total multiplicative inverse operation. In this paper we study algebraic properties of common meadows, which are meadows that introduce, as the inverse of…

Rings and Algebras · Mathematics 2024-05-09 João Dias , Bruno Dinis

We propose and prove a new polynomial identity that implies Schur's partition theorem. We give combinatorial interpretations of some of our expressions in the spirit of Kur\c{s}ung\"oz. We also present some related polynomial and $q$-series…

Combinatorics · Mathematics 2019-03-05 Ali K. Uncu

Among other results, we prove the following theorem about Steiner minimal trees in $d$-dimensional Euclidean space: if two finite sets in $\mathbb{R}^d$ have unique and combinatorially equivalent Steiner minimal trees, then there is a…

Metric Geometry · Mathematics 2019-06-18 Herbert Edelsbrunner , Nataliya Strelkova

For a pair consisting of a gene tree and a species tree, the ancestral configurations at an internal node of the species tree are the distinct sets of gene lineages that can be present at that node. Ancestral configurations appear in…

Combinatorics · Mathematics 2020-06-17 Filippo Disanto , Michael Fuchs , Ariel R. Paningbatan , Noah A. Rosenberg

We investigate the connections between the fields of distributed computing and measurable combinatorics by considering complexity classes of locally checkable labeling problems on regular forests. We show that the most important…

Representing a proof tree by a combinator term that reduces to the tree lets subtle forms of duplication within the tree materialize as duplicated subterms of the combinator term. In a DAG representation of the combinator term these…

Logic in Computer Science · Computer Science 2022-09-27 Christoph Wernhard