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A Longest Common Extension (LCE) query on a text $T$ of length $N$ asks for the length of the longest common prefix of suffixes starting at given two positions. We show that the signature encoding $\mathcal{G}$ of size $w = O(\min(z \log N…

Data Structures and Algorithms · Computer Science 2016-06-28 Takaaki Nishimoto , Tomohiro I , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Rank and select queries on bitmaps are essential building bricks of many compressed data structures, including text indexes, membership and range supporting spatial data structures, compressed graphs, and more. Theoretically considered yet…

Data Structures and Algorithms · Computer Science 2016-05-13 Szymon Grabowski , Marcin Raniszewski

Let $S_{T}(k)$ denote the set of distinct substrings of length $k$ in a string $T$, then the $k$-th substring complexity is defined by its cardinality $|S_{T}(k)|$. Recently, $\delta = \max \{ |S_{T}(k)| / k : k \ge 1 \}$ is shown to be a…

Data Structures and Algorithms · Computer Science 2022-05-26 Akiyoshi Kawamoto , Tomohiro I

Computation on compressed strings is one of the key approaches to processing massive data sets. We consider local subsequence recognition problems on strings compressed by straight-line programs (SLP), which is closely related to…

Data Structures and Algorithms · Computer Science 2011-11-10 Alexander Tiskin

We propose novel compression algorithms for time-varying channel state information (CSI) in wireless communications. The proposed scheme combines (lossy) vector quantisation and (lossless) compression. First, the new vector quantisation…

Information Theory · Computer Science 2022-10-04 Henrique K. Miyamoto , Sheng Yang

We consider the top tree compression scheme introduced by Bille et al. [ICALP 2013] and construct an infinite family of trees on $n$ nodes labeled from an alphabet of size $\sigma$, for which the size of the top DAG is…

Data Structures and Algorithms · Computer Science 2018-01-04 Bartłomiej Dudek , Paweł Gawrychowski

Bille and G{\o}rtz (2011) recently introduced the problem of substring range counting, for which we are asked to store compactly a string $S$ of $n$ characters with integer labels in ([0, u]), such that later, given an interval ([a, b]) and…

Data Structures and Algorithms · Computer Science 2012-02-16 Travis Gagie , Paweł Gawrychowski

In the context of the compressed sensing problem, we propose a new ensemble of sparse random matrices which allow one (i) to acquire and compress a {\rho}0-sparse signal of length N in a time linear in N and (ii) to perfectly recover the…

Information Theory · Computer Science 2013-04-15 Maria Chiara Angelini , Federico Ricci-Tersenghi , Yoshiyuki Kabashima

An indexed sequence of strings is a data structure for storing a string sequence that supports random access, searching, range counting and analytics operations, both for exact matches and prefix search. String sequences lie at the core of…

Data Structures and Algorithms · Computer Science 2012-04-17 Roberto Grossi , Giuseppe Ottaviano

We consider the problem of representing, in a compressed format, a bit-vector $S$ of $m$ bits with $n$ 1s, supporting the following operations, where $b \in \{0, 1 \}$: $rank_b(S,i)$ returns the number of occurrences of bit $b$ in the…

Data Structures and Algorithms · Computer Science 2009-02-17 Roberto Grossi , Alessio Orlandi , Rajeev Raman , S. Srinivasa Rao

In this paper we present new data structures for two extensively studied variants of the orthogonal range searching problem. First, we describe a data structure that supports two-dimensional orthogonal range minima queries in $O(n)$ space…

Data Structures and Algorithms · Computer Science 2020-07-23 Yakov Nekrich

Given an $n$-bit array $A$, the succinct rank data structure problem asks to construct a data structure using space $n+r$ bits for $r\ll n$, supporting rank queries of form $\mathtt{rank}(x)=\sum_{i=0}^{x-1} A[i]$. In this paper, we design…

Data Structures and Algorithms · Computer Science 2019-04-08 Huacheng Yu

Given strings $P$ and $Q$ the (exact) string matching problem is to find all positions of substrings in $Q$ matching $P$. The classical Knuth-Morris-Pratt algorithm [SIAM J. Comput., 1977] solves the string matching problem in linear time…

Data Structures and Algorithms · Computer Science 2010-09-08 Philip Bille

Karpinski and Nekrich (2008) introduced the problem of parameterized range majority, which asks us to preprocess a string of length $n$ such that, given the endpoints of a range, one can quickly find all the distinct elements whose relative…

Data Structures and Algorithms · Computer Science 2016-06-15 Djamal Belazzougui , Travis Gagie , J. Ian Munro , Gonzalo Navarro , Yakov Nekrich

Various grammar compression algorithms have been proposed in the last decade. A grammar compression is a restricted CFG deriving the string deterministically. An efficient grammar compression develops a smaller CFG by finding duplicated…

Data Structures and Algorithms · Computer Science 2016-09-01 Shouhei Fukunaga , Yoshimasa Takabatake , I Tomohiro , Hiroshi Sakamoto

The suffix tree is arguably the most fundamental data structure on strings: introduced by Weiner (SWAT 1973) and McCreight (JACM 1976), it allows solving a myriad of computational problems on strings in linear time. Motivated by its large…

Data Structures and Algorithms · Computer Science 2026-05-07 Ruben Becker , Davide Cenzato , Travis Gagie , Sung-Hwan Kim , Ragnar Groot Koerkamp , Giovanni Manzini , Nicola Prezza

The Lempel-Ziv parsing of a string (LZ77 for short) is one of the most important and widely-used algorithmic tools in data compression and string processing. We show that the Lempel-Ziv parsing of a string of length $n$ on an alphabet of…

Data Structures and Algorithms · Computer Science 2015-07-28 Djamal Belazzougui , Simon J. Puglisi

Given a set of strings, the shortest common superstring problem is to find the shortest possible string that contains all the input strings. The problem is NP-hard, but a lot of work has gone into designing approximation algorithms for…

Data Structures and Algorithms · Computer Science 2019-12-04 Jarno Alanko , Tuukka Norri

In the semialgebraic range searching problem, we are to preprocess $n$ points in $\mathbb{R}^d$ s.t. for any query range from a family of constant complexity semialgebraic sets, all the points intersecting the range can be reported or…

Computational Geometry · Computer Science 2021-05-18 Peyman Afshani , Pingan Cheng

In this paper, a fully compressed pattern matching problem is studied. The compression is represented by straight-line programs (SLPs), i.e. a context-free grammars generating exactly one string; the term fully means that both the pattern…

Data Structures and Algorithms · Computer Science 2013-06-26 Artur Jeż