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Hippocampus segmentation plays a key role in diagnosing various brain disorders such as Alzheimer's disease, epilepsy, multiple sclerosis, cancer, depression and others. Nowadays, segmentation is still mainly performed manually by…

Image and Video Processing · Electrical Eng. & Systems 2020-05-15 Diedre Carmo , Bruna Silva , Clarissa Yasuda , Letícia Rittner , Roberto Lotufo

We propose an attention mechanism for 3D medical image segmentation. The method, named segmentation-by-detection, is a cascade of a detection module followed by a segmentation module. The detection module enables a region of interest to…

Computer Vision and Pattern Recognition · Computer Science 2017-11-02 Min Tang , Zichen Zhang , Dana Cobzas , Martin Jagersand , Jacob L. Jaremko

Hippocampus segmentation on magnetic resonance imaging is of key importance for the diagnosis, treatment decision and investigation of neuropsychiatric disorders. Automatic segmentation is an active research field, with many recent models…

Image and Video Processing · Electrical Eng. & Systems 2021-02-12 Diedre Carmo , Bruna Silva , Clarissa Yasuda , Letícia Rittner , Roberto Lotufo

Background: The hippocampus plays a crucial role in memory and cognition. Because of the associated toxicity from whole brain radiotherapy, more advanced treatment planning techniques prioritize hippocampal avoidance, which depends on an…

Medical Physics · Physics 2023-06-16 Yang Lei , Yifu Ding , Richard L. J. Qiu , Tonghe Wang , Justin Roper , Yabo Fu , Hui-Kuo Shu , Hui Mao , Xiaofeng Yang

Precise volumetric delineation of hippocampal structures is essential for quantifying neurodevelopmental trajectories in pre-term and term infants, where subtle morphological variations may carry prognostic significance. While foundation…

Image and Video Processing · Electrical Eng. & Systems 2026-03-02 Annayah Usman , Behraj Khan , Tahir Qasim Syed

Tissue loss in the hippocampi has been heavily correlated with the progression of Alzheimer's Disease (AD). The shape and structure of the hippocampus are important factors in terms of early AD diagnosis and prognosis by clinicians.…

Image and Video Processing · Electrical Eng. & Systems 2022-03-03 Lukas Folle , Sulaiman Vesal , Nishant Ravikumar , Andreas Maier

The hippocampus plays a vital role in the diagnosis and treatment of many neurological disorders. Recent years, deep learning technology has made great progress in the field of medical image segmentation, and the performance of related…

Computer Vision and Pattern Recognition · Computer Science 2022-11-16 Heyu Huang , Runmin Cong , Lianhe Yang , Ling Du , Cong Wang , Sam Kwong

Accurate hippocampus segmentation in brain MRI is critical for studying cognitive and memory functions and diagnosing neurodevelopmental disorders. While high-field MRIs provide detailed imaging, low-field MRIs are more accessible and…

Image and Video Processing · Electrical Eng. & Systems 2024-10-24 Himashi Peiris , Zhaolin Chen

The hippocampus is one of the most studied neuroanatomical structures due to its involvement in attention, learning, and memory as well as its atrophy in ageing, neurological, and psychiatric diseases. Hippocampal shape changes, however,…

Computer Vision and Pattern Recognition · Computer Science 2023-06-13 Kersten Diers , Hannah Baumeister , Frank Jessen , Emrah Düzel , David Berron , Martin Reuter

We propose a novel 3D fully convolutional deep network for automated pancreas segmentation from both MRI and CT scans. More specifically, the proposed model consists of a 3D encoder that learns to extract volume features at different…

Image and Video Processing · Electrical Eng. & Systems 2022-06-29 Federica Proietto Salanitri , Giovanni Bellitto , Ismail Irmakci , Simone Palazzo , Ulas Bagci , Concetto Spampinato

The hippocampus is a seminal structure in the most common surgically-treated form of epilepsy. Accurate segmentation of the hippocampus aids in establishing asymmetry regarding size and signal characteristics in order to disclose the likely…

Computer Vision and Pattern Recognition · Computer Science 2016-10-27 Mohammad-Parsa Hosseini , Mohammad-Reza Nazem-Zadeh , Dario Pompili , Kourosh Jafari-Khouzani , Kost Elisevich , Hamid Soltanian-Zadeh

Segmentation of brain structures in a large dataset of magnetic resonance images (MRI) necessitates automatic segmentation instead of manual tracing. Automatic segmentation methods provide a much-needed alternative to manual segmentation…

Image and Video Processing · Electrical Eng. & Systems 2020-08-11 Mohammad-Parsa Hosseini , Esmaeil Davoodi , Evangelia Bouzos , Kost Elisevich , Hamid Soltanian-Zadeh

The remarkable performance of large multimodal models (LMMs) has attracted significant interest from the image segmentation community. To align with the next-token-prediction paradigm, current LMM-driven segmentation methods either use…

Computer Vision and Pattern Recognition · Computer Science 2025-07-17 Tao Wang , Changxu Cheng , Lingfeng Wang , Senda Chen , Wuyue Zhao

Medical image segmentation typically adopts a point-wise convolutional segmentation head to predict dense labels, where each output channel is heuristically tied to a specific class. This rigid design limits both feature sharing and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-20 Bin Xie , Gady Agam

Whole brain segmentation is an important neuroimaging task that segments the whole brain volume into anatomically labeled regions-of-interest. Convolutional neural networks have demonstrated good performance in this task. Existing…

Image and Video Processing · Electrical Eng. & Systems 2021-11-01 Yeshu Li , Jonathan Cui , Yilun Sheng , Xiao Liang , Jingdong Wang , Eric I-Chao Chang , Yan Xu

In the isointense stage, the accurate volumetric image segmentation is a challenging task due to the low contrast between tissues. In this paper, we propose a novel very deep network architecture based on a densely convolutional network for…

Computer Vision and Pattern Recognition · Computer Science 2017-09-15 Toan Duc Bui , Jitae Shin , Taesup Moon

We introduce a method that takes advantage of high-quality pretrained multimodal representations to explore fine-grained semantic networks in the human brain. Previous studies have documented evidence of functional localization in the…

Artificial Intelligence · Computer Science 2023-06-07 Cory Efird , Alex Murphy , Joel Zylberberg , Alona Fyshe

Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for volume, thickness and shape measurements. This work introduces a new highly accurate and versatile method based on 3D convolutional neural…

Quantitative Methods · Quantitative Biology 2019-02-07 Philip Novosad , Vladimir Fonov , D. Louis Collins

This report provides an overview of the current state of the art deep learning architectures and optimisation techniques, and uses the ADNI hippocampus MRI dataset as an example to compare the effectiveness and efficiency of different…

Machine Learning · Computer Science 2015-05-11 Matthew Lai

Background: Alzheimers disease is a progressive neurodegenerative disorder and the main cause of dementia in aging. Hippocampus is prone to changes in the early stages of Alzheimers disease. Detection and observation of the hippocampus…

Image and Video Processing · Electrical Eng. & Systems 2021-06-17 Hossein Yousefi-Banaem , Saber Malekzadeh
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