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Calcium is a ubiquitous messenger in neural signaling events. An increasing number of techniques are enabling visualization of neurological activity in animal models via luminescent proteins that bind to calcium ions. These techniques…

Smart systems that can accurately diagnose patients with mental disorders and identify effective treatments based on brain functional imaging data are of great applicability and are gaining much attention. Most previous machine learning…

Computer Vision and Pattern Recognition · Computer Science 2017-12-05 Jumana Dakka , Pouya Bashivan , Mina Gheiratmand , Irina Rish , Shantenu Jha , Russell Greiner

In this work, we present an additive model for space-time data that splits the data into a temporally correlated component and a spatially correlated component. We model the spatially correlated portion using a time-varying Gaussian…

Methodology · Statistics 2017-11-13 Kristjan Greenewald , Seyoung Park , Shuheng Zhou , Alexander Giessing

While deep learning surpasses human-level performance in narrow and specific vision tasks, it is fragile and over-confident in classification. For example, minor transformations in perspective, illumination, or object deformation in the…

Computer Vision and Pattern Recognition · Computer Science 2022-03-15 Maryam Daniali , Edward Kim

We describe and examine an algorithm for tomographic image reconstruction where prior knowledge about the solution is available in the form of training images. We first construct a nonnegative dictionary based on prototype elements from the…

Computer Vision and Pattern Recognition · Computer Science 2015-08-18 Sara Soltani , Martin S. Andersen , Per Christian Hansen

We present a filtering-based method for semantic mapping to simultaneously detect objects and localize their 6 degree-of-freedom pose. For our method, called Contextual Temporal Mapping (or CT-Map), we represent the semantic map as a belief…

Robotics · Computer Science 2018-10-30 Zhen Zeng , Yunwen Zhou , Odest Chadwicke Jenkins , Karthik Desingh

In this work we reduce undersampling artefacts in two-dimensional ($2D$) golden-angle radial cine cardiac MRI by applying a modified version of the U-net. We train the network on $2D$ spatio-temporal slices which are previously extracted…

Image and Video Processing · Electrical Eng. & Systems 2019-08-14 Andreas Kofler , Marc Dewey , Tobias Schaeffter , Christian Wald , Christoph Kolbitsch

We present efficient Bayesian methods for extracting neuronal spiking information from calcium imaging data. The goal of our methods is to sample from the posterior distribution of spike trains and model parameters (baseline concentration,…

Neurons and Cognition · Quantitative Biology 2013-11-28 Eftychios A. Pnevmatikakis , Josh Merel , Ari Pakman , Liam Paninski

Deducing the structure of neural circuits is one of the central problems of modern neuroscience. Recently-introduced calcium fluorescent imaging methods permit experimentalists to observe network activity in large populations of neurons,…

Applications · Statistics 2011-07-22 Yuriy Mishchencko , Joshua T. Vogelstein , Liam Paninski

Accelerating the data acquisition of dynamic magnetic resonance imaging (MRI) leads to a challenging ill-posed inverse problem, which has received great interest from both the signal processing and machine learning community over the last…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Chen Qin , Jo Schlemper , Jose Caballero , Anthony Price , Joseph V. Hajnal , Daniel Rueckert

Leveraging temporal synchronization and association within sight and sound is an essential step towards robust localization of sounding objects. To this end, we propose a space-time memory network for sounding object localization in videos.…

Computer Vision and Pattern Recognition · Computer Science 2021-11-11 Sizhe Li , Yapeng Tian , Chenliang Xu

Convolutional neural networks have been shown to develop internal representations, which correspond closely to semantically meaningful objects and parts, although trained solely on class labels. Class Activation Mapping (CAM) is a recent…

Computer Vision and Pattern Recognition · Computer Science 2016-05-26 Amir Rosenfeld , Shimon Ullman

Thermal infrared (TIR) target tracking methods often adopt the correlation filter (CF) framework due to its computational efficiency. However, the low resolution of TIR images, along with tracking interference, significantly limits the…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Shang Zhang , Xiaobo Ding , Huanbin Zhang , Ruoyan Xiong , Yue Zhang

Real-time video analysis remains a challenging problem in computer vision, requiring efficient processing of both spatial and temporal information while maintaining computational efficiency. Existing approaches often struggle to balance…

Computer Vision and Pattern Recognition · Computer Science 2025-07-31 Shahla John

An accurate detection and tracking of devices such as guiding catheters in live X-ray image acquisitions is an essential prerequisite for endovascular cardiac interventions. This information is leveraged for procedural guidance, e.g.,…

Computer Vision and Pattern Recognition · Computer Science 2024-05-03 Saahil Islam , Venkatesh N. Murthy , Dominik Neumann , Badhan Kumar Das , Puneet Sharma , Andreas Maier , Dorin Comaniciu , Florin C. Ghesu

Recent self-supervised advances in medical computer vision exploit global and local anatomical self-similarity for pretraining prior to downstream tasks such as segmentation. However, current methods assume i.i.d. image acquisition, which…

Computer Vision and Pattern Recognition · Computer Science 2023-12-13 Mengwei Ren , Neel Dey , Martin A. Styner , Kelly Botteron , Guido Gerig

The Locally Competitive Algorithm (LCA) uses local competition between non-spiking leaky integrator neurons to infer sparse representations, allowing for potentially real-time execution on massively parallel neuromorphic architectures such…

Computer Vision and Pattern Recognition · Computer Science 2022-06-01 Gavin Parpart , Carlos Gonzalez , Terrence C. Stewart , Edward Kim , Jocelyn Rego , Andrew O'Brien , Steven Nesbit , Garrett T. Kenyon , Yijing Watkins

There exists a correlation between geospatial activity temporal patterns and type of land use. A novel self-supervised approach is proposed to stratify landscape based on mobility activity time series. First, the time series signal is…

Computer Vision and Pattern Recognition · Computer Science 2024-01-18 Yi Cao , Swetava Ganguli , Vipul Pandey

Miniaturized calcium imaging is an emerging neural recording technique that has been widely used for monitoring neural activity on a large scale at a specific brain region of rats or mice. Most existing calcium-image analysis pipelines…

Image and Video Processing · Electrical Eng. & Systems 2023-04-18 Zhe Chen , Garrett J. Blair , Chengdi Cao , Jim Zhou , Daniel Aharoni , Peyman Golshani , Hugh T. Blair , Jason Cong

Understanding spatio-temporal patterns in polar ice layers is essential for tracking changes in ice sheet balance and assessing ice dynamics. While convolutional neural networks are widely used in learning ice layer patterns from raw…

Machine Learning · Computer Science 2024-11-07 Zesheng Liu , Maryam Rahnemoonfar