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Related papers: Diffusion of Colloidal Rods in Corrugated Channels

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Exact calculations of transmission and reflection coefficients in surface randomly corrugated optical waveguides are presented. As the length of the corrugated part of the waveguide increases, there is a strong preference to forward…

Disordered Systems and Neural Networks · Physics 2009-10-31 A. Garcia-Martin , J. A. Torres , J. J. Saenz , M. Nieto-Vesperinas

We analyze the diffusion of charged and neutral tracers suspended in an electrolyte embedded in a channel of varying cross-section. Making use of systematic approximations, the diffusion equation governing the motion of tracers is mapped…

Soft Condensed Matter · Physics 2016-02-17 Paolo Malgaretti , Ignacio Pagonabarraga , Miguel J Rubi

This paper considers particle propagation in a cylindrical molecular communication channel, e.g. a simplified model of a blood vessel. Emitted particles are influenced by diffusion, flow, and a vertical force induced e.g. by gravity or…

Computational Physics · Physics 2019-02-26 Maximilian Schäfer , Wayan Wicke , Rudolf Rabenstein , Robert Schober

In biological system like cell the macromolecules which are anisotropic particles diffuse in a crowded medium. In the present work we have studied the diffusion of spheroidal particles diffusing between cylindrical obstacles by varying the…

Soft Condensed Matter · Physics 2024-09-02 Vikki Anand Varma , Sujin B Babu

Channel-mediated transport is ubiquitous in biology. A series of works by different theoreticians have sought to determine how the diffusive flux through a channel depends on (a) stochastic gating, (b) channel geometry, and (c)…

Statistical Mechanics · Physics 2026-03-17 Sean D Lawley

We investigate wave propagation in rotationally symmetric tubes with a periodic spatial modulation of cross section. Using an asymptotic perturbation analysis, the governing quasi two-dimensional reaction-diffusion equation can be reduced…

Pattern Formation and Solitons · Physics 2017-01-05 A. Ziepke , S. Martens , H. Engel

We show that transport in the presence of entropic barriers exhibits peculiar characteristics which makes it distinctly different from that occurring through energy barriers. The constrained dynamics yields a scaling regime for the particle…

Statistical Mechanics · Physics 2009-11-11 D. Reguera , G. Schmid , P. S. Burada , J. M. Rubí , P. Hänggi

A single colloidal sphere circulating around a periodically modulated optical vortex trap can enter a dynamical state in which it intermittently alternates between freely running around the ring-like optical vortex and becoming trapped in…

Statistical Mechanics · Physics 2009-11-11 Sang-Hyuk Lee , David G. Grier

We implement molecular dynamics simulations in canonical ensemble to study the effect of confinement on a $2d$ crystal of point particles interacting with an inverse power law potential proportional to $r^{-12}$ in a narrow channel. This…

Soft Condensed Matter · Physics 2014-09-30 M. Ebrahim Foulaadvand , Neda Ojaghlou

Diverse processes -- e.g., environmental pollution, groundwater remediation, oil recovery, filtration, and drug delivery -- involve the transport of colloidal particles in porous media. Using confocal microscopy, we directly visualize this…

Soft Condensed Matter · Physics 2021-03-23 Navid Bizmark , Joanna Schneider , Rodney D. Priestley , Sujit S. Datta

We study the transport of inertial particles in water flow in porous media. Our interest lies in understanding the accumulation of particles including the possibility of clogging. We propose that accumulation can be a result of hydrodynamic…

We study biased, diffusive transport of Brownian particles through narrow, spatially periodic structures in which the motion is constrained in lateral directions. The problem is analyzed under the perspective of the Fick-Jacobs equation…

Statistical Mechanics · Physics 2007-07-10 P. S. Burada , G. Schmid , D. Reguera , J. M. Rubi , P. Hanggi

We study the hydrodynamic interactions between colloids suspended in a compressible fluid inside a rigid channel. Using lattice-Boltzmann simulations and a simplified hydrodynamic theory, we find that the diffusive dynamics of density…

Soft Condensed Matter · Physics 2013-02-13 Derek Frydel , Haim Diamant

We have studied a one-dimensional channel with a wider, straight region irradiated by an external electromagnetic field. In this system the interplay between interference effects and resonance phenomena manifests itself and provides a new…

Mesoscale and Nanoscale Physics · Physics 2009-10-31 S. Blom , L. Y. Gorelik

We show the existence of a resonant behavior of the current of Brownian particles confined in a pulsating channel. The interplay between the periodic oscillations of the shape of the channel and a force applied along its axis leads to an…

Soft Condensed Matter · Physics 2016-12-15 M. Florencia Carusela , J. Miguel Rubí

The diffusion of active microscopic organisms in complex environments plays an important role in a wide range of biological phenomena from cell colony growth to single organism transport. Here, we investigate theoretically and…

Fluid Dynamics · Physics 2018-01-16 Juan L. Aragones , Shahrzad Yazdi , Alfredo Alexander-Katz

We study the diffusive behavior of biased Brownian particles in a two dimensional confined geometry filled with the freezing obstacles. The transport properties of these particles are investigated for various values of the obstacles density…

Biological Physics · Physics 2020-07-16 Narender Khatri , P. S. Burada

Excluded-volume effects can play an important role in determining transport properties in diffusion of particles. Here, the diffusion of finite-sized hard-core interacting particles in two or three dimensions is considered systematically…

Analysis of PDEs · Mathematics 2012-01-06 Maria Bruna , S. Jonathan Chapman

Molecular Dynamics simulations of water molecules in nanometre sized cylindrical channels connecting two reservoirs show that the permeation of water is very sensitive to the channel radius and to electric polarization of the embedding…

Soft Condensed Matter · Physics 2009-11-07 Rosalind Allen , Simone Melchionna , Jean-Pierre Hansen

Micro- and nano-swimmers moving in a fluid solvent confined by structures that produce entropic barriers are often described by overdamped active Brownian particle dynamics, where viscous effects are large and inertia plays no role.…

Soft Condensed Matter · Physics 2023-03-28 Narender Khatri , Raymond Kapral