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Graph kernels are kernel methods measuring graph similarity and serve as a standard tool for graph classification. However, the use of kernel methods for node classification, which is a related problem to graph representation learning, is…

Machine Learning · Computer Science 2019-10-08 Yu Tian , Long Zhao , Xi Peng , Dimitris N. Metaxas

With the recent rise in the amount of structured data available, there has been considerable interest in methods for machine learning with graphs. Many of these approaches have been kernel methods, which focus on measuring the similarity…

Machine Learning · Computer Science 2017-08-07 P. -L. Giscard , R. C. Wilson

We develop a theory to measure the variance and covariance of probability distributions defined on the nodes of a graph, which takes into account the distance between nodes. Our approach generalizes the usual (co)variance to the setting of…

Physics and Society · Physics 2021-08-19 Karel Devriendt , Samuel Martin-Gutierrez , Renaud Lambiotte

We analytically study proximity and distance properties of various kernels and similarity measures on graphs. This helps to understand the mathematical nature of such measures and can potentially be useful for recommending the adoption of…

Combinatorics · Mathematics 2018-08-17 Konstantin Avrachenkov , Pavel Chebotarev , Dmytro Rubanov

We consider the problem of classifying graphs using graph kernels. We define a new graph kernel, called the generalized shortest path kernel, based on the number and length of shortest paths between nodes. For our example classification…

Data Structures and Algorithms · Computer Science 2015-11-20 Linus Hermansson , Fredrik D. Johansson , Osamu Watanabe

We introduce propagation kernels, a general graph-kernel framework for efficiently measuring the similarity of structured data. Propagation kernels are based on monitoring how information spreads through a set of given graphs. They leverage…

Machine Learning · Statistics 2014-10-14 Marion Neumann , Roman Garnett , Christian Bauckhage , Kristian Kersting

Graph-structured data arise in wide applications, such as computer vision, bioinformatics, and social networks. Quantifying similarities among graphs is a fundamental problem. In this paper, we develop a framework for computing graph…

Machine Learning · Statistics 2018-09-11 Zhen Zhang , Mianzhi Wang , Yijian Xiang , Yan Huang , Arye Nehorai

A graphical model provides a compact and efficient representation of the association structure of a multivariate distribution by means of a graph. Relevant features of the distribution are represented by vertices, edges and other…

Statistics Theory · Mathematics 2020-09-03 Alberto Roverato , Robert Castelo

An important problem in network analysis is predicting a node attribute using both network covariates, such as graph embedding coordinates or local subgraph counts, and conventional node covariates, such as demographic characteristics.…

Methodology · Statistics 2023-02-24 Robert Lunde , Elizaveta Levina , Ji Zhu

Graph kernels methods are based on an implicit embedding of graphs within a vector space of large dimension. This implicit embedding allows to apply to graphs methods which where until recently solely reserved to numerical data. Within the…

Computer Vision and Pattern Recognition · Computer Science 2008-10-21 François-Xavier Dupé , Luc Brun

Graph Retrieval has witnessed continued interest and progress in the past few years. In thisreport, we focus on neural network based approaches for Graph matching and retrieving similargraphs from a corpus of graphs. We explore methods…

Information Retrieval · Computer Science 2022-04-25 Chitrank Gupta , Yash Jain

The widespread relevance of complex networks is a valuable tool in the analysis of a broad range of systems. There is a demand for tools which enable the extraction of meaningful information and allow the comparison between different…

Physics and Society · Physics 2011-03-30 Kathryn Cooper , Mauricio Barahona

Most existing neural networks for learning graphs address permutation invariance by conceiving of the network as a message passing scheme, where each node sums the feature vectors coming from its neighbors. We argue that this imposes a…

Machine Learning · Computer Science 2018-01-09 Risi Kondor , Hy Truong Son , Horace Pan , Brandon Anderson , Shubhendu Trivedi

A fundamental problem on graph-structured data is that of quantifying similarity between graphs. Graph kernels are an established technique for such tasks; in particular, those based on random walks and return probabilities have proven to…

Machine Learning · Computer Science 2021-01-21 Leo Huang , Andrew Graven , David Bindel

This work describes how the formalization of complex network concepts in terms of discrete mathematics, especially mathematical morphology, allows a series of generalizations and important results ranging from new measurements of the…

Statistical Mechanics · Physics 2007-09-19 Luciano da Fontoura Costa , Luis Enrique C. da Rocha

In this proceeding we give an overview of the idea of covariance (or equivariance) featured in the recent development of convolutional neural networks (CNNs). We study the similarities and differences between the use of covariance in…

Machine Learning · Computer Science 2019-06-07 Miranda C. N. Cheng , Vassilis Anagiannis , Maurice Weiler , Pim de Haan , Taco S. Cohen , Max Welling

Graph kernel is a powerful tool measuring the similarity between graphs. Most of the existing graph kernels focused on node labels or attributes and ignored graph hierarchical structure information. In order to effectively utilize graph…

Machine Learning · Computer Science 2020-11-03 Kai Ma , Peng Wan , Daoqiang Zhang

Finding a new mathematical representations for graph, which allows direct comparison between different graph structures, is an open-ended research direction. Having such a representation is the first prerequisite for a variety of machine…

Methodology · Statistics 2014-04-21 Anshumali Shrivastava , Ping Li

Measuring similarity between complex objects is a fundamental task in many scientific fields. When objects are represented as graphs, graph similarity/distance measures offer a powerful framework for quantifying structural resemblance.…

Combinatorics · Mathematics 2025-09-30 Matthias Dehmer , Izudin Redžepović , Niko Tratnik , Petra Žigert Pleteršek

This work develops a generic framework, called the bag-of-paths (BoP), for link and network data analysis. The central idea is to assign a probability distribution on the set of all paths in a network. More precisely, a Gibbs-Boltzmann…

Machine Learning · Statistics 2017-06-30 Kevin Françoisse , Ilkka Kivimäki , Amin Mantrach , Fabrice Rossi , Marco Saerens
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