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GPUs are uniquely suited to accelerate (SQL) analytics workloads thanks to their massive compute parallelism and High Bandwidth Memory (HBM) -- when datasets fit in the GPU HBM, performance is unparalleled. Unfortunately, GPU HBMs remain…

Artificial intelligence workloads, especially transformer models, exhibit emergent sparsity in which computations perform selective sparse access to dense data. The workloads are inefficient on hardware designed for dense computations and…

Data Structures and Algorithms · Computer Science 2024-02-23 Brian Wheatman , Meghana Madhyastha , Randal Burns

The tremendous increase in the size and heterogeneity of supercomputers makes it very difficult to predict the performance of a scheduling algorithm. Therefore, dynamic solutions, where scheduling decisions are made at runtime have…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-04-16 Olivier Beaumont , Loris Marchal

Problems in scientific computing, such as distributing large sparse matrix operations, have analogous formulations as hypergraph partitioning problems. A hypergraph is a generalization of a traditional graph wherein "hyperedges" may connect…

Data Structures and Algorithms · Computer Science 2022-06-16 Justin Sybrandt , Ruslan Shaydulin , Ilya Safro

We suggest a technique to reduce the storage size of sparse matrices at no loss of information. We call this technique Diagonally-Adressed (DA) storage. It exploits the typically low matrix bandwidth of matrices arising in applications. For…

Numerical Analysis · Mathematics 2025-01-24 Jens Saak , Jonas Schulze

Modeling data sharing in GPU programs is a challenging task because of the massive parallelism and complex data sharing patterns provided by GPU architectures. Better GPU caching efficiency can be achieved through careful task scheduling…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-04 Lingda Li , Ari B. Hayes , Stephen A. Hackler , Eddy Z. Zhang , Mario Szegedy , Shuaiwen Leon Song

We consider the problem of approximating partition functions for Ising models. We make use of recent tools in combinatorial optimization: the Sherali-Adams and Lasserre convex programming hierarchies, in combination with variational methods…

Machine Learning · Computer Science 2016-07-13 Andrej Risteski

Memory networks are neural networks with an explicit memory component that can be both read and written to by the network. The memory is often addressed in a soft way using a softmax function, making end-to-end training with backpropagation…

Machine Learning · Statistics 2016-05-25 Sarath Chandar , Sungjin Ahn , Hugo Larochelle , Pascal Vincent , Gerald Tesauro , Yoshua Bengio

A novel parallel algorithm for matrix multiplication is presented. The hyper-systolic algorithm makes use of a one-dimensional processor abstraction. The procedure can be implemented on all types of parallel systems. It can handle…

Mathematical Software · Computer Science 2007-05-23 Thomas Lippert , Nikolay Petkov , Paolo Palazzari , Klaus Schilling

Tensor network methods provide a scalable solution to represent high-dimensional data. However, their efficacy is often limited by static, expert-defined structures that fail to adapt to evolving data correlations. We address this…

Computational Engineering, Finance, and Science · Computer Science 2026-03-31 Zheng Guo , Aditya Deshpande , Xinyu Wang , Brian C. Kiedrowski , Alex A. Gorodetsky

Graph Visualization, also known as Graph Drawing, aims to find geometric embeddings of graphs that optimize certain criteria. Stress is a widely used metric; stress is minimized when every pair of nodes is positioned at their shortest path…

Computational Geometry · Computer Science 2024-02-13 Florian Grötschla , Joël Mathys , Robert Veres , Roger Wattenhofer

This article introduces HODLR3D, a class of hierarchical matrices arising out of $N$-body problems in three dimensions. HODLR3D relies on the fact that certain off-diagonal matrix sub-blocks arising out of the $N$-body problems in three…

Numerical Analysis · Mathematics 2023-08-01 V A Kandappan , Vaishnavi Gujjula , Sivaram Ambikasaran

This paper investigates the execution of tree-shaped task graphs using multiple processors. Each edge of such a tree represents some large data. A task can only be executed if all input and output data fit into memory, and a data can only…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-10-02 Lionel Eyraud-Dubois , Loris Marchal , Oliver Sinnen , Frédéric Vivien

Large neural networks excel in many domains, but they are expensive to train and fine-tune. A popular approach to reduce their compute or memory requirements is to replace dense weight matrices with structured ones (e.g., sparse, low-rank,…

We present the algebraic representation and basic algorithms for MultiAspect Graphs (MAGs). A MAG is a structure capable of representing multilayer and time-varying networks, as well as higher-order networks, while also having the property…

Discrete Mathematics · Computer Science 2016-09-27 Klaus Wehmuth , Éric Fleury , Artur Ziviani

The multiplication of a sparse matrix with a dense vector (SpMV) is a key component in many numerical schemes and its performance is known to be severely limited by main memory access. Several numerical schemes require the multiplication of…

Numerical Analysis · Mathematics 2023-01-11 Christie L. Alappat , Georg Hager , Olaf Schenk , Gerhard Wellein

A fast non-convex low-rank matrix decomposition method for potential field data separation is proposed. The singular value decomposition of the large size trajectory matrix, which is also a block Hankel matrix, is obtained using a fast…

Geophysics · Physics 2022-08-16 Dan Zhu , Rosemary Renaut , Hongwei Li , Tianyou Liu

In recent decades, High Performance Computing (HPC) has undergone significant enhancements, particularly in the realm of hardware platforms, aimed at delivering increased processing power while keeping power consumption within reasonable…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-10-03 S. -Kazem Shekofteh , Christian Alles , Nils Kochendörfer , Holger Fröning

Matrix diagonalization is almost always involved in computing the density matrix needed in quantum chemistry calculations. In the case of modest matrix sizes ($\lesssim$ 5000), performance of traditional dense diagonalization algorithms on…

Chemical Physics · Physics 2023-06-23 Joshua Finkelstein , Christian F. A. Negre , Jean-Luc Fattebert

We present a parallel hierarchical solver for general sparse linear systems on distributed-memory machines. For large-scale problems, this fully algebraic algorithm is faster and more memory-efficient than sparse direct solvers because it…

Numerical Analysis · Mathematics 2017-12-21 Chao Chen , Hadi Pouransari , Sivasankaran Rajamanickam , Erik G. Boman , Eric Darve