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Iterative methods on irregular grids have been used widely in all areas of comptational science and engineering for solving partial differential equations with complex geometry. They provide the flexibility to express complex shapes with…

Mathematical Software · Computer Science 2016-12-05 Naoki Yoshifuji , Ryo Sakamoto , Keigo Nitadori , Jun Makino

Large-scale parallel numerical simulations are essential for a wide range of engineering problems that involve complex, coupled physical processes interacting across a broad range of spatial and temporal scales. The data structures involved…

Mathematical Software · Computer Science 2018-10-11 Fande Kong , Roy H. Stogner , Derek R. Gaston , John W. Peterson , Cody J. Permann , Andrew E. Slaughter , Richard C. Martineau

Hypergraph partitioning is a pervasive NP-hard problem, and accelerating its computation on GPU can both slice time-to-solution and raise quality of results. In this work, we implement a multi-level hypergraph partitioning algorithm on GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-17 Marco Ronzani , Cristina Silvano

Data movement is the dominating factor affecting performance and energy in modern computing systems. Consequently, many algorithms have been developed to minimize the number of I/O operations for common computing patterns. Matrix…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-26 Johannes de Fine Licht , Grzegorz Kwasniewski , Torsten Hoefler

Partitioning graphs into blocks of roughly equal size such that few edges run between blocks is a frequently needed operation when processing graphs on a parallel computer. When a topology of a distributed system is known an important task…

Data Structures and Algorithms · Computer Science 2020-01-23 Marcelo Fonseca Faraj , Alexander van der Grinten , Henning Meyerhenke , Jesper Larsson Träff , Christian Schulz

Directional interpolation is a fast and efficient compression technique for high-frequency Helmholtz boundary integral equations, but it requires a very large amount of storage in its original form. Algebraic recompression can significantly…

Numerical Analysis · Mathematics 2023-10-23 Steffen Börm , Janne Henningsen

Sparse matrix-vector multiplication (SpMV) is a fundamental operation with a wide range of applications in scientific computing and artificial intelligence. However, the large scale and sparsity of sparse matrix often make it a performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-15 Chen Yan , Boyu Diao , Hangda Liu , Zhulin An , Yongjun Xu

We investigate the problem of multiplex graph embedding, that is, graphs in which nodes interact through multiple types of relations (dimensions). In recent years, several methods have been developed to address this problem. However, the…

Machine Learning · Computer Science 2023-12-29 Kamel Abdous , Nairouz Mrabah , Mohamed Bouguessa

The vision of super computer at every desk can be realized by powerful and highly parallel CPUs or GPUs or APUs. Graphics processors once specialized for the graphics applications only, are now used for the highly computational intensive…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-04-16 Chittampally Vasanth Raja , Srinivas Balasubramanian , Prakash S Raghavendra

Homomorphic Encryption (HE) enables users to securely outsource both the storage and computation of sensitive data to untrusted servers. Not only does HE offer an attractive solution for security in cloud systems, but lattice-based HE…

Cryptography and Security · Computer Science 2022-09-07 Kaustubh Shivdikar , Gilbert Jonatan , Evelio Mora , Neal Livesay , Rashmi Agrawal , Ajay Joshi , Jose Abellan , John Kim , David Kaeli

This paper presents an efficient technique for matrix-vector and vector-transpose-matrix multiplication in distributed-memory parallel computing environments, where the matrices are unstructured, sparse, and have a substantially larger…

Mathematical Software · Computer Science 2018-12-04 Jonathan Eckstein , Gyorgy Matyasfalvi

Matrix factorization (MF) discovers latent features from observations, which has shown great promises in the fields of collaborative filtering, data compression, feature extraction, word embedding, etc. While many problem-specific…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-14 Wei Tan , Shiyu Chang , Liana Fong , Cheng Li , Zijun Wang , Liangliang Cao

The inherent diversity of computation types within the deep neural network (DNN) models often requires a variety of specialized units in hardware processors, which limits computational efficiency, increasing both inference latency and power…

Machine Learning · Computer Science 2024-08-21 Ruiqi Sun , Siwei Ye , Jie Zhao , Xin He , Jianzhe Lin , Yiran Li , An Zou

This paper describes a hierarchical learning strategy for generating sparse representations of multivariate datasets. The hierarchy arises from approximation spaces considered at successively finer scales. A detailed analysis of stability,…

Machine Learning · Statistics 2019-10-23 Prashant Shekhar , Abani Patra

At the core of any inference procedure in deep neural networks are dot product operations, which are the component that require the highest computational resources. A common approach to reduce the cost of inference is to reduce its memory…

Machine Learning · Computer Science 2018-12-19 Simon Wiedemann , Klaus-Robert Müller , Wojciech Samek

The $k^2$-tree is a compact data structure designed to efficiently store sparse binary matrices by leveraging both sparsity and clustering of nonzero elements. This representation supports efficiently navigational operations and complex…

Data Structures and Algorithms · Computer Science 2025-05-19 Gabriel Carmona , Giovanni Manzini

We consider the problem of developing an efficient multi-threaded implementation of the matrix-vector multiplication algorithm for sparse matrices with structural symmetry. Matrices are stored using the compressed sparse row-column format…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-05-18 Vicente H. F. Batista , George O. Ainsworth , Fernando L. B. Ribeiro

We present a fast algorithm for linear least squares problems governed by hierarchically block separable (HBS) matrices. Such matrices are generally dense but data-sparse and can describe many important operators including those derived…

Numerical Analysis · Mathematics 2014-06-17 Kenneth L. Ho , Leslie Greengard

In this work, we present randomized compression algorithms for flat rank-structured matrices with shared bases, termed uniform Block Low-Rank (BLR) matrices. Our main contribution is a technique called tagging, which improves upon the…

Numerical Analysis · Mathematics 2025-12-16 Katherine J. Pearce , Anna Yesypenko , James Levitt , Per-Gunnar Martinsson

This paper presents a hierarchical low-rank decomposition algorithm assuming any matrix element can be computed in $O(1)$ time. The proposed algorithm computes rank-revealing decompositions of sub-matrices with a blocked adaptive cross…

Numerical Analysis · Mathematics 2019-09-06 Yang Liu , Wissam Sid-Lakhdar , Elizaveta Rebrova , Pieter Ghysels , Xiaoye Sherry Li
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