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Mock halo catalogues are indispensable data products for developing and validating cosmological inference pipelines. A major challenge in generating mock catalogues is modelling the halo or galaxy bias, which is the mapping from matter…

Cosmology and Nongalactic Astrophysics · Physics 2024-10-16 Simon Ding , Guilhem Lavaux , Jens Jasche

Various laboratory-based experiments are underway attempting to detect dark matter directly. The event rates and detailed signals expected in these experiments depend on the dark matter phase space distribution on sub-milliparsec scales.…

Astrophysics · Physics 2011-08-31 Daniele S. M. Fantin , Michael R. Merrifield , Anne M. Green

Generating mocks for future sky surveys requires large volumes and high resolutions, which is computationally expensive even for fast simulations. In this work we try to develop numerical schemes to calibrate various halo and matter…

Cosmology and Nongalactic Astrophysics · Physics 2020-04-15 Biwei Dai , Yu Feng , Uros Seljak , Sukhdeep Singh

Structure identification in cosmological simulations plays an important role in analysing simulation outputs. The definition of these structures directly impacts the inferred properties derived from these simulations. This paper proposes a…

Astrophysics of Galaxies · Physics 2025-01-16 Robel Geda , Romain Teyssier

We present a new empirical model for the mass assembly of dark matter halos. We approximate the growth of individual halos as a simple power-law function of time, where the power-law index smoothly decreases as the halo transitions from the…

Cosmology and Nongalactic Astrophysics · Physics 2022-03-11 Andrew P. Hearin , Jonás Chaves-Montero , Matthew R. Becker , Alex Alarcon

Merge trees, a type of topological descriptor, serve to identify and summarize the topological characteristics associated with scalar fields. They present a great potential for the analysis and visualization of time-varying data. First,…

Human-Computer Interaction · Computer Science 2021-08-02 Lin Yan , Talha Bin Masood , Farhan Rasheed , Ingrid Hotz , Bei Wang

We have constructed merger trees for galaxies in the Illustris Simulation by directly tracking the baryonic content of subhalos. These merger trees are used to calculate the galaxy-galaxy merger rate as a function of descendant stellar…

This paper presents \pandora, a novel parallel algorithm for efficiently constructing dendrograms for single-linkage hierarchical clustering, including \hdbscan. Traditional dendrogram construction methods from a minimum spanning tree…

Machine Learning · Computer Science 2025-04-29 Piyush Sao , Andrey Prokopenko , Damien Lebrun-Grandié

Recent developments in retrieval-augmented generation (RAG) for selecting relevant tools from a tool knowledge base enable LLM agents to scale their complex tool calling capabilities to hundreds or thousands of external tools, APIs, or…

Computation and Language · Computer Science 2025-02-12 Elias Lumer , Pradeep Honaganahalli Basavaraju , Myles Mason , James A. Burke , Vamse Kumar Subbiah

The merger and accretion probabilities of dark matter halos have so far only been calculated for an infinitesimal time interval. This means that a Monte-Carlo simulation with very small time steps is necessary to find the merger history of…

Astrophysics · Physics 2008-10-15 Esfandiar Alizadeh , Benjamin Wandelt

In a previous paper, we described a new method for including detailed information about substructure in semi-analytic models of halo formation based on merger trees. In this paper, we compare the predictions of our model with results from…

Astrophysics · Physics 2009-11-10 James E. Taylor , Arif Babul

Although retrieval-augmented generation(RAG) significantly improves generation quality by retrieving external knowledge bases and integrating generated content, it faces computational efficiency bottlenecks, particularly in knowledge…

Machine Learning · Computer Science 2026-02-03 Zihang Li , Yangdong Ruan , Wenjun Liu , Zhengyang Wang , Tong Yang

We describe a method for generating halo catalogues on the light cone using the \Abacus{AbacusSummit} suite of $N$-body simulations. The main application of these catalogues is the construction of realistic mock galaxy catalogues and weak…

Cosmology and Nongalactic Astrophysics · Physics 2021-10-25 Boryana Hadzhiyska , Lehman H. Garrison , Daniel Eisenstein , Sownak Bose

We describe a new methodology to analyze the reionization process in numerical simulations: the chronology and the geometry of reionization is investigated by means of merger histories of individual HII regions. From the merger tree of…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-11 Jonathan Chardin , Dominique Aubert , Pierre Ocvirk

The cosmic web plays a major role in the formation and evolution of galaxies and defines, to a large extent, their properties. However, the relation between galaxies and environment is still not well understood. Here we present a machine…

Astrophysics of Galaxies · Physics 2018-04-11 Jianan Hui , Miguel A. Aragon-Calvo , Xinping Cui , James M. Flegal

We present a new software, HYPPO, that enables the automatic tuning of hyperparameters of various deep learning (DL) models. Unlike other hyperparameter optimization (HPO) methods, HYPPO uses adaptive surrogate models and directly accounts…

Using (a,b)-trees as an example, we show how to perform a parallel split with logarithmic latency and parallel join, bulk updates, intersection, union (or merge), and (symmetric) set difference with logarithmic latency and with information…

Data Structures and Algorithms · Computer Science 2016-05-12 Yaroslav Akhremtsev , Peter Sanders

We revisit the use of probabilistic values, which include the well-known Shapley and Banzhaf values, to rank features for explaining the local predicted values of decision trees. The quality of feature rankings is typically assessed with…

Machine Learning · Computer Science 2026-04-22 Weida Li , Yaoliang Yu , Bryan Kian Hsiang Low

The mass assembly history (MAH) of dark matter halos plays a crucial role in shaping the formation and evolution of galaxies. MAHs are used extensively in semi-analytic and empirical models of galaxy formation, yet current analytic methods…

Astrophysics of Galaxies · Physics 2024-09-05 Tri Nguyen , Chirag Modi , L. Y. Aaron Yung , Rachel S. Somerville

Galaxy merger timescales are crucial for understanding and modeling galaxy formation in our hierarchically structured Universe. However, previous studies have reported widely varying dependencies of merger timescales on initial orbital…

Astrophysics of Galaxies · Physics 2025-07-08 Kun Xu , Y. P. Jing
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