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Motivated by the phenomenology of transport through the Golgi apparatus of cells, we study a multi-species model with boundary injection of one species of particle, interconversion between the different species of particle, and driven…

Statistical Mechanics · Physics 2011-09-29 Himani Sachdeva , Mustansir Barma , Madan Rao

Periodic fin structures are often employed to enhance heat transfer in compact cooling solutions and heat exchangers. Adjoint-based optimization methods are able to further increase the heat transfer by optimizing the fin geometry. However,…

Computational Engineering, Finance, and Science · Computer Science 2025-04-07 Maarten Blommaert , Arthur Vangeffelen , Mehmet Basaran , Geert Buckinx , Martine Baelmans

We derive a model for the optimization of the bending and torsional rigidities of non-homogeneous elastic rods. This is achieved by studying a sharp interface shape optimization problem with perimeter penalization, that treats both…

Optimization and Control · Mathematics 2024-05-01 Patrick Dondl , Alberto Maione , Steve Wolff-Vorbeck

We leverage a large set of numerical simulations to study optimized geometrical configurations for Phase Change Materials (PCMs) cells. We consider a PCM cell as a square enclosure with a solid substance that undergoes melting under the…

Fluid Dynamics · Physics 2025-10-08 Paolo Proia , Mauro Sbragaglia , Giacomo Falcucci

A preliminary iterative 3D meso-scale structural model of the femur was developed, in which bar and shell elements were used to represent trabecular and cortical bone respectively. The cross-sectional areas of the bar elements and the…

Medical Physics · Physics 2012-03-01 Andrew T. M. Phillips

We investigate structural and dynamical properties of moderately polydisperse emulsions across an extended range of droplet volume fractions phgr, encompassing fluid and glassy states up to jamming. Combining experiments and simulations, we…

Soft Condensed Matter · Physics 2017-10-09 Chi Zhang , Nicoletta Gnan , Thomas G. Mason , Emanuela Zaccarelli , Frank Scheffold

We develop an analytical theory to explain the experimentally-observed morphological transitions of giant vesicles induced by AC electric fields (1). The model treats the inner and suspending media as lossy dielectrics, while the membrane…

Biological Physics · Physics 2015-05-13 Petia Vlahovska , Ruben Serral Gracia , Said Aranda , Rumiana Dimova

To solve large-scale or high-resolution topology optimization problem, a novel algorithm is developed based on modified bi-directional evolutionary structure optimization (BESO) and extended finite element method (XFEM). Within XFEM, a set…

Applied Physics · Physics 2026-04-07 Hongxin Wang , Jie Liu , Guilin Wen

Numerical treatment of the problem of two-dimensional viscous fluid flow in and around circular porous inclusions is considered. The mathematical model is described by Navier-Stokes equation in the free flow domain $\Omega_f$ and nonlinear…

Numerical Analysis · Mathematics 2022-09-05 Maria Vasilyeva , S. M. Mallikarjunaiah , D. Palaniappan

The Finite element method (FEM) has long served as the computational backbone for topology optimization (TO). However, for designing structures undergoing large deformations, conventional FEM-based TO often exhibits numerical instabilities…

Computational Engineering, Finance, and Science · Computer Science 2026-03-17 Rahul Kumar Padhy , Aaditya Chandrasekhar , Krishnan Suresh

We theoretically study the elastic deformation of a fluid membrane induced by an adhering spherical colloidal particle within the framework of a Helfrich energy. Based on a full optimization of the membrane shape we find a continuous…

Soft Condensed Matter · Physics 2009-11-07 Markus Deserno , Thomas Bickel

Micro-structured materials consisting of an array of microstructures are engineered to provide the specific material properties. This present work investigates the design of cellular materials under the framework of level set, so as to…

Computational Engineering, Finance, and Science · Computer Science 2018-11-13 Jie Gao , Hao Li , Zhen Luo , Liang Gao , Peigen Li

In this paper, phase field models are developed for multi-component vesicle membranes with different lipid compositions and membranes with free boundary. These models are used to simulate the deformation of membranes under the elastic…

Biological Physics · Physics 2007-05-23 Xiaoqiang Wang , Qiang Du

Motility is fundamental to the survival and proliferation of microorganisms. The E. coli bacterium propels itself using a bundle of rotating helical flagella. If one flagellum reverses its rotational direction, it leaves the bundle,…

Soft Condensed Matter · Physics 2025-04-30 Pierre Martin , Tapan Chandra Adhyapak , Holger Stark

We show that the standard Fermi--Pasta--Ulam system, with a suitable choice for the interparticle potential, constitutes a model for glasses, and indeed an extremely simple and manageable one. Indeed, it allows one to describe the landscape…

Statistical Mechanics · Physics 2015-07-22 Andrea Carati , Alberto Maiocchi , Luigi Galgani , Graziano Amati

In this study, we present the bicubic Hermite element method (BHEM), a new computational framework devised for the elastodynamic simulation of parametric thin-shell structures. The BHEM is constructed based on parametric quadrilateral…

Graphics · Computer Science 2025-03-28 Xingyu Ni , Xuwen Chen , Cheng Yu , Bin Wang , Baoquan Chen

Microelectromechanical systems (MEMS) gyroscopes are widely used in consumer and automotive applications. They have to fulfill a vast number of product requirements which lead to complex mechanical designs of the resonating structure.…

Computational Engineering, Finance, and Science · Computer Science 2025-12-29 Daniel Schiwietz , Marian Hörsting , Eva Maria Weig , Peter Degenfeld-Schonburg , Matthias Wenzel

The article describes parallel multiphysics simulations of charged particles in microfluidic flows with the waLBerla framework. To this end, three physical effects are coupled: rigid body dynamics, fluid flow modelled by a lattice Boltzmann…

Computational Engineering, Finance, and Science · Computer Science 2014-10-27 Dominik Bartuschat , Ulrich Rüde

The Generalized Finite Element Method (GFEM) is a Partition of Unity Method (PUM), where the trial space of standard Finite Element Method (FEM) is augmented with non-polynomial shape functions with compact support. These shape functions,…

Numerical Analysis · Mathematics 2015-05-27 I. Babuska , U. Banerjee

We apply the Bogomol'nyi technique, which is usually invoked in the study of solitons or models with topological invariants, to the case of elastic energy of vesicles. We show that spontaneous bending contribution caused by any deformation…

Soft Condensed Matter · Physics 2009-11-07 Jerome Benoit , Avadh Saxena , Turab Lookman
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